G1441652


Basic Information

Item Value
gene id G1441652
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 34228375 ~ 34228715 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1650315
ggactttatactgtcccaaaactttttgcagttagagctacaggatgcacatttctgtttgaaaaggctAGCCTTTGTTTTTTTTTgattgactgtgtgtattggttcctgacttccctgaacagttgcatattgcggggactatttgatgctattgcagtctgccacaggatgtttttgtgctggtcgagggcagtcaggtctggagtgaaccaagggctatatctgttcttagttctacattttttttaaaggggcatgcgtatttaagatggtgaggaaattacttttaaagaacgaccaggcatcctcgactgacgggatgaggtcagtatccttcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1650315 True 341 lncRNA 0.43 1 34228375 34228715

Neighbor

gene id symbol gene type direction distance location
LOC110493772 LOC106564803 coding upstream 95752 34129926 ~ 34132623 (+)
LOC110493770 LOC106585018 coding upstream 107152 34040261 ~ 34121223 (+)
LOC110493769 LOC106564807 coding upstream 194252 33996168 ~ 34034123 (+)
LOC110493768 hebp1 coding upstream 232659 33983660 ~ 33995716 (+)
LOC110493767 LOC106564808 coding upstream 258275 33937534 ~ 33970100 (+)
LOC110493777 NA coding downstream 13198 34241913 ~ 34254653 (+)
LOC110493778 LOC106564798 coding downstream 61302 34290017 ~ 34317682 (+)
LOC110493783 LOC106564979 coding downstream 202172 34430887 ~ 34443032 (+)
LOC110493785 mal coding downstream 231375 34460090 ~ 34468487 (+)
slc8a1a LOC106564793 coding downstream 281892 34510607 ~ 34560437 (+)
G1441641 NA non-coding upstream 11162 34216908 ~ 34217213 (+)
G1441578 NA non-coding upstream 14270 34143637 ~ 34214105 (+)
G1441582 LOC106585043 non-coding upstream 87108 34139960 ~ 34141267 (+)
G1441595 NA non-coding upstream 89795 34138126 ~ 34138580 (+)
G1441581 NA non-coding upstream 91580 34136504 ~ 34136795 (+)
LOC110493775 LOC106564801 non-coding downstream 2732 34173076 ~ 34233684 (+)
G1441614 NA non-coding downstream 6483 34235198 ~ 34237791 (+)
G1441844 NA non-coding downstream 89529 34318244 ~ 34319132 (+)
G1441315 NA other upstream 251900 33976193 ~ 33976475 (+)
G1440890 LOC106564813 other upstream 703841 33524199 ~ 33524534 (+)
G1440162 NA other upstream 1272318 32951800 ~ 32956057 (+)
G1440066 NA other upstream 1430943 32797098 ~ 32797432 (+)
G1439962 LOC106564826 other upstream 1461668 32712860 ~ 32766707 (+)
LOC110493802 LOC106564779 other downstream 940183 35120694 ~ 35184540 (+)
G1443221 NA other downstream 1445249 35673964 ~ 35744642 (+)
G1443251 NA other downstream 1518157 35746872 ~ 35751790 (+)
LOC118940407 NA other downstream 2010229 36234292 ~ 36242642 (+)

Expression


Co-expression Network