Gene
RNA
| Item | Value |
|---|---|
| gene id | G1441845 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 34318240 ~ 34319107 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1650541 | False | 868 | lncRNA | 0.42 | 1 | 34318240 | 34319107 |
| TU1650542 | True | 797 | lncRNA | 0.42 | 1 | 34318311 | 34319107 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pex6 | LOC106564799 | coding | downstream | 48190 | 34254192 ~ 34270050 (-) |
| LOC110493774 | LOC106564802 | coding | downstream | 152118 | 34146075 ~ 34166122 (-) |
| LOC110493771 | LOC106564804 | coding | downstream | 173977 | 34133047 ~ 34144263 (-) |
| LOC110493773 | NA | coding | downstream | 189983 | 34123017 ~ 34128257 (-) |
| LOC110493171 | NA | coding | downstream | 484276 | 33825265 ~ 33833964 (-) |
| slc22a7a | LOC106564980 | coding | upstream | 11933 | 34331040 ~ 34344763 (-) |
| ttbk1a | LOC106564797 | coding | upstream | 29660 | 34348767 ~ 34397687 (-) |
| tpcn3 | tpc1 | coding | upstream | 94436 | 34413543 ~ 34430556 (-) |
| pgap4 | tmem246 | coding | upstream | 127249 | 34446356 ~ 34468485 (-) |
| LOC118940658 | NA | coding | upstream | 177513 | 34496620 ~ 34496669 (-) |
| G1441832 | NA | non-coding | downstream | 9535 | 34302292 ~ 34308705 (-) |
| G1441837 | NA | non-coding | downstream | 14771 | 34302861 ~ 34303469 (-) |
| G1441758 | NA | non-coding | downstream | 79196 | 34238727 ~ 34239044 (-) |
| G1441669 | LOC106585018 | non-coding | downstream | 219081 | 34060713 ~ 34099159 (-) |
| G1441509 | NA | non-coding | downstream | 322547 | 33992263 ~ 33995693 (-) |
| G1442136 | NA | non-coding | upstream | 36939 | 34356046 ~ 34356269 (-) |
| G1442151 | NA | non-coding | upstream | 48271 | 34367378 ~ 34367606 (-) |
| G1442172 | NA | non-coding | upstream | 105847 | 34424954 ~ 34425944 (-) |
| LOC110493763 | LOC106564812 | other | downstream | 901887 | 33413110 ~ 33515866 (-) |
| G1440786 | NA | other | downstream | 931712 | 33385937 ~ 33386528 (-) |
| G1440781 | NA | other | downstream | 935521 | 33381901 ~ 33382719 (-) |
| G1440711 | NA | other | downstream | 1065861 | 33238621 ~ 33252379 (-) |
| G1440683 | LOC106606817 | other | downstream | 1123965 | 33189835 ~ 33194275 (-) |
| G1442139 | NA | other | upstream | 40995 | 34360102 ~ 34361306 (-) |
| G1442336 | LOC106564790 | other | upstream | 401320 | 34720427 ~ 34720792 (-) |
| G1442443 | NA | other | upstream | 584975 | 34904082 ~ 34904616 (-) |
| LOC110493800 | LOC106564782 | other | upstream | 741092 | 35023723 ~ 35061975 (-) |
| G1442932 | rbbp9 | other | upstream | 909647 | 35228754 ~ 35232154 (-) |
