G1442139



Basic Information


Item Value
gene id G1442139
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 34360102 ~ 34361306 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1650874
gatccTTTTGCTCCAAGACTTGGCGGTCCGGTATCGTTTTCTGTGcgttagcagagaaaacagtctatgacttgggtgactggagtgtcttgtcaattttatgggctttcctctgacaccgcctattatataggtcctggattgcaggaagcttggccccagtgatgtacagagcaatacgcaccaccctctgcagcgccttacggtcagatgctgagcagctgccacaccaagcagtgatgcaactggtcaggatgctctcgatggtgcatcagaataactttttgaggatctggggacccatgccaaatcttttcagtctcctgagggggaaaaggttttgtcatgccctcttcatgactgtcttggtgtgtttggaccatgatagttcgttggtgatgtggacaccaaggaacttggaactctcgacccgctccactacagccccattgatgttaatgggggcctgttcggcccgccttttcctgtattccacgatcagctccttgtcttgctcacattgaggaagaggttgttgtcctggcaccacactgccagttctctgacctcctccctatagcctgtctcatcgttgtcggtgatcaggcctaccactgttgtgttgtcagcaaacttaatgatggtgtttggagtcgtgtttggccacacagtcgtgggtgagcagggagtacaggagaggactaagtacacaccactgaggggccccagtgttgaggatcagcgtggcagacgtgttgtttcctacccttaccacctggcggCGGCCCGTCAAAgtgcaggatccagttgcagagggaggtgtttcgtcccagggtccttagcttggtgatgagcttcgtaggcactatggtgttgaacgctgagctgtagtcaatggatAGCATTCTCacctaggtgttccttttgtccaggtgggaaagggcagtggggagtgtgattgagattgtgtcatctgtggatctgttgggctcaagatggaagtggtcagatgatttGGATGCTACCCtagaggactgttttgctagcacagactggaatatgttccggattgaggagtataccacctcagtcatcggtttaatcaataagtgcatcaacaaaATGCTTGAGCAATGGATTAGGCAGGCCTCTGAAGGGTGAGGATATGAAGTGTGGGGTTTTGCAATGGGAAAACTCCTGTTCTC

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1650874 True 1205 TUCP 0.51 1 34360102 34361306

Neighbor


gene id symbol gene type direction distance location
slc22a7a LOC106564980 coding downstream 15339 34331040 ~ 34344763 (-)
pex6 LOC106564799 coding downstream 90052 34254192 ~ 34270050 (-)
LOC110493774 LOC106564802 coding downstream 193980 34146075 ~ 34166122 (-)
LOC110493771 LOC106564804 coding downstream 215839 34133047 ~ 34144263 (-)
LOC110493773 NA coding downstream 231845 34123017 ~ 34128257 (-)
tpcn3 tpc1 coding upstream 52237 34413543 ~ 34430556 (-)
pgap4 tmem246 coding upstream 85050 34446356 ~ 34468485 (-)
LOC118940658 NA coding upstream 135314 34496620 ~ 34496669 (-)
tmem178 LOC106564792 coding upstream 229543 34589353 ~ 34605070 (-)
gemin6 gemin6 coding upstream 424231 34785537 ~ 34788361 (-)
G1442136 NA non-coding downstream 3833 34356046 ~ 34356269 (-)
G1441845 NA non-coding downstream 40995 34318240 ~ 34319107 (-)
G1441832 NA non-coding downstream 51397 34302292 ~ 34308705 (-)
G1441837 NA non-coding downstream 56633 34302861 ~ 34303469 (-)
G1441758 NA non-coding downstream 121058 34238727 ~ 34239044 (-)
G1442151 NA non-coding upstream 6072 34367378 ~ 34367606 (-)
G1442172 NA non-coding upstream 63648 34424954 ~ 34425944 (-)
G1442188 NA non-coding upstream 99288 34460594 ~ 34465401 (-)
G1442194 LOC106564793 non-coding upstream 110475 34471781 ~ 34560447 (-)
LOC110493763 LOC106564812 other downstream 943749 33413110 ~ 33515866 (-)
G1440786 NA other downstream 973574 33385937 ~ 33386528 (-)
G1440781 NA other downstream 977383 33381901 ~ 33382719 (-)
G1440711 NA other downstream 1107723 33238621 ~ 33252379 (-)
G1440683 LOC106606817 other downstream 1165827 33189835 ~ 33194275 (-)
G1442336 LOC106564790 other upstream 359121 34720427 ~ 34720792 (-)
G1442443 NA other upstream 542776 34904082 ~ 34904616 (-)
LOC110493800 LOC106564782 other upstream 698893 35023723 ~ 35061975 (-)
G1442932 rbbp9 other upstream 867448 35228754 ~ 35232154 (-)
LOC110495171 cssa12h2orf73 other upstream 1254398 35615229 ~ 35617995 (-)

Expression


G1442139 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
End of interactive chart.

G1442139 Expression in each Bioproject

Bar chart with 19 bars.
G1442139 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
End of interactive chart.

Co-expression Network