G1441880


Basic Information

Item Value
gene id G1441880
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 34369102 ~ 34369371 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1650581
tctctaaatagttattgcatagtttggagctgtgcttcgggtcattgtcctgttgtaggaggaaattagCTCCAATTAAACGCAGTCCACAGGATATGGCATTGCGTTGCAAAATTAAGTgacagccttccttcttcaagatcccttttaccctgtacaaacctcccactttaccaccatcaaagcacccccagaccatcacattacctccaccatgcttgacagatggcgtcaagcactcctccagcatcttttcactTTGTCTGCGTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1650581 True 270 lncRNA 0.46 1 34369102 34369371

Neighbor

gene id symbol gene type direction distance location
LOC110493778 LOC106564798 coding upstream 51420 34290017 ~ 34317682 (+)
LOC110493777 NA coding upstream 115010 34241913 ~ 34254653 (+)
LOC110493775 LOC106564801 coding upstream 135418 34173076 ~ 34233684 (+)
LOC110493772 LOC106564803 coding upstream 236479 34129926 ~ 34132623 (+)
LOC110493770 LOC106585018 coding upstream 247879 34040261 ~ 34121223 (+)
LOC110493783 LOC106564979 coding downstream 61516 34430887 ~ 34443032 (+)
LOC110493785 mal coding downstream 90719 34460090 ~ 34468487 (+)
slc8a1a LOC106564793 coding downstream 141236 34510607 ~ 34560437 (+)
LOC110493788 LOC106564978 coding downstream 211610 34580981 ~ 34583315 (+)
map4k3a LOC106564791 coding downstream 240442 34609813 ~ 34694633 (+)
G1441879 NA non-coding upstream 347 34368518 ~ 34368755 (+)
G1441876 NA non-coding upstream 3219 34365602 ~ 34365883 (+)
G1441871 NA non-coding upstream 7775 34356579 ~ 34361327 (+)
G1441872 NA non-coding upstream 12844 34353259 ~ 34356258 (+)
G1441867 NA non-coding upstream 22224 34346583 ~ 34346878 (+)
G1441881 NA non-coding downstream 101 34369472 ~ 34369690 (+)
G1441882 NA non-coding downstream 376 34369747 ~ 34370120 (+)
G1441883 NA non-coding downstream 856 34370227 ~ 34371127 (+)
G1441884 NA non-coding downstream 2221 34371592 ~ 34372054 (+)
G1441919 NA non-coding downstream 39563 34408934 ~ 34409150 (+)
G1441315 NA other upstream 392627 33976193 ~ 33976475 (+)
G1440890 LOC106564813 other upstream 844568 33524199 ~ 33524534 (+)
G1440162 NA other upstream 1413045 32951800 ~ 32956057 (+)
G1440066 NA other upstream 1571670 32797098 ~ 32797432 (+)
LOC110493802 LOC106564779 other downstream 799527 35120694 ~ 35184540 (+)
G1443221 NA other downstream 1304593 35673964 ~ 35744642 (+)
G1443251 NA other downstream 1377501 35746872 ~ 35751790 (+)
LOC118940407 NA other downstream 1869573 36234292 ~ 36242642 (+)
G1443844 NA other downstream 1961864 36331235 ~ 36375374 (+)

Expression


Co-expression Network