G1441883


Basic Information

Item Value
gene id G1441883
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 34370227 ~ 34371127 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1650584
cctctgtacgcctatgtagatattccattaaaaataaaTCTGCCGTTTCgagttacaatagtcatttacaacaataacaatgtctacactgtatttctgaacaatttgatgttattttaatggactttttgttgttgtttttctttaaaaaacaaggacatttctaagtgaccccaaacttttgaacggtagtgtacatcacTTTTGGGCAAAATAGTATGATTGCATGTTTTTAAATGGAGAATGACATTCTCACTGAAAAGACCCATAAAGAACTGAAACACTAATGGAAGCTACAGGCTGAGACACATTGGTTTTAACAATGAGGAAACATTTTGTCAACTTCAACTGTTCTCCAAGAATTTGCTGAATTTCCTCTATAATTCATTCAGCTAAAAGACTGGAACATTCCCCATATTTTCTTTCGTGCATCTTTTTATGTATGTGGTAACGGTCAGCTTAAACACATTTGGTGGCAGCGATGGGAAGACTCACGGTTTAAACCTTTTCATTTAACATTTTCAACCAAAAGGTTTTCATGTCAGGACTTTCTAACACTGACGTCAAGAACATGTTCAGTGTGAAGAAAACGTTTTGAAACTAGGTTGCACCACCTGAACATgtccaaatattttttttctgttaCAAAAACATTTTGCTCGGTTGTGCCATACTGAATATGACCCAGCTACCTGGATGTTTGCTACATTATTCTCATCAGAATGACAAAGTGTCATCATGTATGCGTATATCTTGTTTCACCAGTCAGTGTGTCATAACGAGGGCATCAAGTGCAGTGCAACCCTGACAAATGTCAACAGGAATCTGCCCGTGGTATGGACCAGCCTATCTGGCATTTGCCGGAACTGCACTATGAGAAAATGCTCTTGTGGACTCTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1650584 True 901 lncRNA 0.37 1 34370227 34371127

Neighbor

gene id symbol gene type direction distance location
LOC110493778 LOC106564798 coding upstream 52545 34290017 ~ 34317682 (+)
LOC110493777 NA coding upstream 116135 34241913 ~ 34254653 (+)
LOC110493775 LOC106564801 coding upstream 136543 34173076 ~ 34233684 (+)
LOC110493772 LOC106564803 coding upstream 237604 34129926 ~ 34132623 (+)
LOC110493770 LOC106585018 coding upstream 249004 34040261 ~ 34121223 (+)
LOC110493783 LOC106564979 coding downstream 59760 34430887 ~ 34443032 (+)
LOC110493785 mal coding downstream 88963 34460090 ~ 34468487 (+)
slc8a1a LOC106564793 coding downstream 139480 34510607 ~ 34560437 (+)
LOC110493788 LOC106564978 coding downstream 209854 34580981 ~ 34583315 (+)
map4k3a LOC106564791 coding downstream 238686 34609813 ~ 34694633 (+)
G1441882 NA non-coding upstream 107 34369747 ~ 34370120 (+)
G1441881 NA non-coding upstream 537 34369472 ~ 34369690 (+)
G1441880 NA non-coding upstream 856 34369102 ~ 34369371 (+)
G1441879 NA non-coding upstream 1472 34368518 ~ 34368755 (+)
G1441876 NA non-coding upstream 4344 34365602 ~ 34365883 (+)
G1441884 NA non-coding downstream 465 34371592 ~ 34372054 (+)
G1441919 NA non-coding downstream 37807 34408934 ~ 34409150 (+)
G1441907 NA non-coding downstream 42415 34413542 ~ 34414307 (+)
G1441906 NA non-coding downstream 44504 34415631 ~ 34416259 (+)
G1441929 NA non-coding downstream 82796 34453923 ~ 34457723 (+)
G1441315 NA other upstream 393752 33976193 ~ 33976475 (+)
G1440890 LOC106564813 other upstream 845693 33524199 ~ 33524534 (+)
G1440162 NA other upstream 1414170 32951800 ~ 32956057 (+)
G1440066 NA other upstream 1572795 32797098 ~ 32797432 (+)
LOC110493802 LOC106564779 other downstream 797771 35120694 ~ 35184540 (+)
G1443221 NA other downstream 1302837 35673964 ~ 35744642 (+)
G1443251 NA other downstream 1375745 35746872 ~ 35751790 (+)
LOC118940407 NA other downstream 1867817 36234292 ~ 36242642 (+)
G1443844 NA other downstream 1960108 36331235 ~ 36375374 (+)

Expression


Co-expression Network