G1441906


Basic Information

Item Value
gene id G1441906
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 34415631 ~ 34416259 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1650607
TGACAACTACAATGTGGAAGAGGACAAAGAACATCCTGGCTGAGATGTGAGTGACCGCGGTGAAACCACTGGACAGCACATGCCACTGGTTGACCACGGTGAGTTCCAGTAACAGGATAAAAGAGGAAACAATGTTGTTAAAATTGTTCTTGCAGTAGTTGTGCTTGGCGAACACTGAGTTTTTGAGCAGAGCGTTTCCACAGAATGCCTTATCCGGATCAGTGGAGTTGGCCTCGAAAAAGCGTATTTTCCCTTTGAACAGCTCCATTCCCACCATGGCGAATATGT

Function

NR:

description
two pore calcium channel protein 1-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1650607 True 288 lncRNA 0.47 2 34415631 34416259

Neighbor

gene id symbol gene type direction distance location
LOC110493778 LOC106564798 coding upstream 97949 34290017 ~ 34317682 (+)
LOC110493777 NA coding upstream 161539 34241913 ~ 34254653 (+)
LOC110493775 LOC106564801 coding upstream 181947 34173076 ~ 34233684 (+)
LOC110493772 LOC106564803 coding upstream 283008 34129926 ~ 34132623 (+)
LOC110493770 LOC106585018 coding upstream 294408 34040261 ~ 34121223 (+)
LOC110493783 LOC106564979 coding downstream 14628 34430887 ~ 34443032 (+)
LOC110493785 mal coding downstream 43831 34460090 ~ 34468487 (+)
slc8a1a LOC106564793 coding downstream 94348 34510607 ~ 34560437 (+)
LOC110493788 LOC106564978 coding downstream 164722 34580981 ~ 34583315 (+)
map4k3a LOC106564791 coding downstream 193554 34609813 ~ 34694633 (+)
G1441907 NA non-coding upstream 1324 34413542 ~ 34414307 (+)
G1441919 NA non-coding upstream 6481 34408934 ~ 34409150 (+)
G1441884 NA non-coding upstream 43577 34371592 ~ 34372054 (+)
G1441883 NA non-coding upstream 44504 34370227 ~ 34371127 (+)
G1441882 NA non-coding upstream 45511 34369747 ~ 34370120 (+)
G1441929 NA non-coding downstream 37664 34453923 ~ 34457723 (+)
G1441989 NA non-coding downstream 146096 34562355 ~ 34562687 (+)
G1441990 NA non-coding downstream 152227 34568486 ~ 34569276 (+)
G1441995 NA non-coding downstream 173103 34589362 ~ 34590022 (+)
G1441315 NA other upstream 439156 33976193 ~ 33976475 (+)
G1440890 LOC106564813 other upstream 891097 33524199 ~ 33524534 (+)
G1440162 NA other upstream 1459574 32951800 ~ 32956057 (+)
G1440066 NA other upstream 1618199 32797098 ~ 32797432 (+)
LOC110493802 LOC106564779 other downstream 752639 35120694 ~ 35184540 (+)
G1443221 NA other downstream 1257705 35673964 ~ 35744642 (+)
G1443251 NA other downstream 1330613 35746872 ~ 35751790 (+)
LOC118940407 NA other downstream 1822685 36234292 ~ 36242642 (+)
G1443844 NA other downstream 1914976 36331235 ~ 36375374 (+)

Expression


Co-expression Network