G1441989


Basic Information

Item Value
gene id G1441989
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 34562355 ~ 34562687 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1650711
gatCACACGCCTATCTTGTCAATATGATACACATTCTTTAATCCAACCGGAGAACAACTTtcccctctcattgaagccatGGAAGTTCACGGCCAACTGTGGTACTGTTAGCAGAAAACAGAATCCCCCATTATAGTAAATAGAAAAATGGCAATCTTTCTGTAAATTTTTTTTTCATGGTAACAATAATTGTTTCAAATAAACCAGGTGTATGTCCTTCAACCGAGTATtttaaaatcacacacagaataaGTTATAAAGCTAATATAAACCCATTTGGCCTTCAACTTGAGTTACTCAAtgaaaaatatacagtgccttgcgaaagtattc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1650711 True 333 lncRNA 0.35 1 34562355 34562687

Neighbor

gene id symbol gene type direction distance location
slc8a1a LOC106564793 coding upstream 4031 34510607 ~ 34560437 (+)
LOC110493785 mal coding upstream 93868 34460090 ~ 34468487 (+)
LOC110493783 LOC106564979 coding upstream 119323 34430887 ~ 34443032 (+)
LOC110493778 LOC106564798 coding upstream 244673 34290017 ~ 34317682 (+)
LOC110493777 NA coding upstream 308263 34241913 ~ 34254653 (+)
LOC110493788 LOC106564978 coding downstream 18294 34580981 ~ 34583315 (+)
map4k3a LOC106564791 coding downstream 47126 34609813 ~ 34694633 (+)
LOC110493792 LOC106564790 coding downstream 132710 34695397 ~ 34769825 (+)
LOC110493791 NA coding downstream 214176 34776863 ~ 34780593 (+)
LOC110493794 srsf7 coding downstream 224603 34787290 ~ 34802322 (+)
G1441929 NA non-coding upstream 104632 34453923 ~ 34457723 (+)
G1441906 NA non-coding upstream 146096 34415631 ~ 34416259 (+)
G1441907 NA non-coding upstream 148048 34413542 ~ 34414307 (+)
G1441919 NA non-coding upstream 153205 34408934 ~ 34409150 (+)
G1441990 NA non-coding downstream 5799 34568486 ~ 34569276 (+)
G1441995 NA non-coding downstream 26675 34589362 ~ 34590022 (+)
G1442004 NA non-coding downstream 44166 34606853 ~ 34607089 (+)
G1442005 NA non-coding downstream 44768 34607455 ~ 34607674 (+)
G1442041 NA non-coding downstream 159611 34722298 ~ 34722511 (+)
G1441315 NA other upstream 585880 33976193 ~ 33976475 (+)
G1440890 LOC106564813 other upstream 1037821 33524199 ~ 33524534 (+)
G1440162 NA other upstream 1606298 32951800 ~ 32956057 (+)
G1440066 NA other upstream 1764923 32797098 ~ 32797432 (+)
LOC110493802 LOC106564779 other downstream 606211 35120694 ~ 35184540 (+)
G1443221 NA other downstream 1111277 35673964 ~ 35744642 (+)
G1443251 NA other downstream 1184185 35746872 ~ 35751790 (+)
LOC118940407 NA other downstream 1676257 36234292 ~ 36242642 (+)
G1443844 NA other downstream 1768548 36331235 ~ 36375374 (+)

Expression


Co-expression Network