G1442004


Basic Information

Item Value
gene id G1442004
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 34606853 ~ 34607089 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1650728
ggatcttgaggacccatgccaaatgagggaaggagaggttgttatcctggcaccacactgccaggtctctgacctcctccctataggctgtctcatcgttgccagtgatcaggcctaccactgttgtgtcattggcaaacttaatgatggtgttggagtcgtgcttggccatgcagttctgggtgaacagggagttgggagggggctgagcacgcacccctgaggggcccccgtgtt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1650728 True 237 lncRNA 0.57 1 34606853 34607089

Neighbor

gene id symbol gene type direction distance location
LOC110493788 LOC106564978 coding upstream 23538 34580981 ~ 34583315 (+)
slc8a1a LOC106564793 coding upstream 48529 34510607 ~ 34560437 (+)
LOC110493785 mal coding upstream 138366 34460090 ~ 34468487 (+)
LOC110493783 LOC106564979 coding upstream 163821 34430887 ~ 34443032 (+)
LOC110493778 LOC106564798 coding upstream 289171 34290017 ~ 34317682 (+)
map4k3a LOC106564791 coding downstream 2724 34609813 ~ 34694633 (+)
LOC110493792 LOC106564790 coding downstream 88308 34695397 ~ 34769825 (+)
LOC110493791 NA coding downstream 169774 34776863 ~ 34780593 (+)
LOC110493794 srsf7 coding downstream 180201 34787290 ~ 34802322 (+)
LOC110493796 LOC106564787 coding downstream 237261 34844350 ~ 34903202 (+)
G1441995 NA non-coding upstream 16831 34589362 ~ 34590022 (+)
G1441990 NA non-coding upstream 37577 34568486 ~ 34569276 (+)
G1441989 NA non-coding upstream 44166 34562355 ~ 34562687 (+)
G1441929 NA non-coding upstream 149130 34453923 ~ 34457723 (+)
G1442005 NA non-coding downstream 366 34607455 ~ 34607674 (+)
G1442041 NA non-coding downstream 115209 34722298 ~ 34722511 (+)
G1442086 NA non-coding downstream 235485 34842574 ~ 34842788 (+)
G1441315 NA other upstream 630378 33976193 ~ 33976475 (+)
G1440890 LOC106564813 other upstream 1082319 33524199 ~ 33524534 (+)
G1440162 NA other upstream 1650796 32951800 ~ 32956057 (+)
G1440066 NA other upstream 1809421 32797098 ~ 32797432 (+)
LOC110493802 LOC106564779 other downstream 561809 35120694 ~ 35184540 (+)
G1443221 NA other downstream 1066875 35673964 ~ 35744642 (+)
G1443251 NA other downstream 1139783 35746872 ~ 35751790 (+)
LOC118940407 NA other downstream 1631855 36234292 ~ 36242642 (+)
G1443844 NA other downstream 1724146 36331235 ~ 36375374 (+)

Expression


Co-expression Network