Gene
RNA
| Item | Value |
|---|---|
| gene id | G1442336 |
| gene name | LOC106564790 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 34720427 ~ 34720792 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| son of sevenless homolog 1-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1651088 | True | 366 | TUCP | 0.55 | 1 | 34720427 | 34720792 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tmem178 | LOC106564792 | coding | downstream | 115357 | 34589353 ~ 34605070 (-) |
| LOC118940658 | NA | coding | downstream | 223758 | 34496620 ~ 34496669 (-) |
| pgap4 | tmem246 | coding | downstream | 269594 | 34446356 ~ 34468485 (-) |
| tpcn3 | tpc1 | coding | downstream | 289871 | 34413543 ~ 34430556 (-) |
| ttbk1a | LOC106564797 | coding | downstream | 322740 | 34348767 ~ 34397687 (-) |
| gemin6 | gemin6 | coding | upstream | 64745 | 34785537 ~ 34788361 (-) |
| LOC118940117 | NA | coding | upstream | 93561 | 34814353 ~ 34815153 (-) |
| LOC110493798 | if4a3 | coding | upstream | 241972 | 34962764 ~ 34970771 (-) |
| LOC118940673 | NA | coding | upstream | 244474 | 34965266 ~ 34965392 (-) |
| LOC118940674 | NA | coding | upstream | 245417 | 34966209 ~ 34966342 (-) |
| G1442335 | sos1 | non-coding | downstream | 743 | 34719434 ~ 34719684 (-) |
| G1442333 | NA | non-coding | downstream | 4871 | 34715319 ~ 34715556 (-) |
| G1442283 | NA | non-coding | downstream | 6413 | 34643824 ~ 34714014 (-) |
| G1442300 | NA | non-coding | downstream | 25376 | 34692863 ~ 34695051 (-) |
| G1442291 | NA | non-coding | downstream | 65828 | 34653940 ~ 34654599 (-) |
| G1442337 | NA | non-coding | upstream | 1905 | 34722697 ~ 34723115 (-) |
| G1442340 | NA | non-coding | upstream | 5540 | 34726332 ~ 34726950 (-) |
| G1442341 | NA | non-coding | upstream | 10678 | 34731470 ~ 34731787 (-) |
| G1442347 | NA | non-coding | upstream | 16151 | 34736943 ~ 34776594 (-) |
| G1442316 | NA | non-coding | upstream | 18994 | 34739786 ~ 34839092 (-) |
| G1442139 | NA | other | downstream | 359121 | 34360102 ~ 34361306 (-) |
| LOC110493763 | LOC106564812 | other | downstream | 1304074 | 33413110 ~ 33515866 (-) |
| G1440786 | NA | other | downstream | 1333899 | 33385937 ~ 33386528 (-) |
| G1440781 | NA | other | downstream | 1337708 | 33381901 ~ 33382719 (-) |
| G1440711 | NA | other | downstream | 1468048 | 33238621 ~ 33252379 (-) |
| G1442443 | NA | other | upstream | 183290 | 34904082 ~ 34904616 (-) |
| LOC110493800 | LOC106564782 | other | upstream | 339407 | 35023723 ~ 35061975 (-) |
| G1442932 | rbbp9 | other | upstream | 507962 | 35228754 ~ 35232154 (-) |
| LOC110495171 | cssa12h2orf73 | other | upstream | 894912 | 35615229 ~ 35617995 (-) |
| LOC110493173 | slc29a1 | other | upstream | 1259189 | 35979898 ~ 36012831 (-) |
