Gene
RNA
| Item | Value |
|---|---|
| gene id | G1442365 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 34761190 ~ 34761954 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| hypothetical protein cypCar_00046089 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1651122 | True | 431 | lncRNA | 0.52 | 2 | 34761190 | 34761954 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tmem178 | LOC106564792 | coding | downstream | 156120 | 34589353 ~ 34605070 (-) |
| LOC118940658 | NA | coding | downstream | 264521 | 34496620 ~ 34496669 (-) |
| pgap4 | tmem246 | coding | downstream | 310357 | 34446356 ~ 34468485 (-) |
| tpcn3 | tpc1 | coding | downstream | 330634 | 34413543 ~ 34430556 (-) |
| ttbk1a | LOC106564797 | coding | downstream | 363503 | 34348767 ~ 34397687 (-) |
| gemin6 | gemin6 | coding | upstream | 23583 | 34785537 ~ 34788361 (-) |
| LOC118940117 | NA | coding | upstream | 52399 | 34814353 ~ 34815153 (-) |
| LOC110493798 | if4a3 | coding | upstream | 200810 | 34962764 ~ 34970771 (-) |
| LOC118940673 | NA | coding | upstream | 203312 | 34965266 ~ 34965392 (-) |
| LOC118940674 | NA | coding | upstream | 204255 | 34966209 ~ 34966342 (-) |
| G1442341 | NA | non-coding | downstream | 29403 | 34731470 ~ 34731787 (-) |
| G1442340 | NA | non-coding | downstream | 34240 | 34726332 ~ 34726950 (-) |
| G1442337 | NA | non-coding | downstream | 38075 | 34722697 ~ 34723115 (-) |
| G1442335 | sos1 | non-coding | downstream | 41506 | 34719434 ~ 34719684 (-) |
| G1442333 | NA | non-coding | downstream | 45634 | 34715319 ~ 34715556 (-) |
| G1442372 | LOC106564790 | non-coding | upstream | 4604 | 34766558 ~ 34768239 (-) |
| G1442442 | NA | non-coding | upstream | 139934 | 34901888 ~ 34903193 (-) |
| G1442458 | NA | non-coding | upstream | 153012 | 34914966 ~ 34915185 (-) |
| G1442651 | NA | non-coding | upstream | 163594 | 34925548 ~ 34929740 (-) |
| LOC110493799 | LOC106564784 | non-coding | upstream | 214138 | 34976092 ~ 35008618 (-) |
| G1442336 | LOC106564790 | other | downstream | 40398 | 34720427 ~ 34720792 (-) |
| G1442139 | NA | other | downstream | 399884 | 34360102 ~ 34361306 (-) |
| LOC110493763 | LOC106564812 | other | downstream | 1344837 | 33413110 ~ 33515866 (-) |
| G1440786 | NA | other | downstream | 1374662 | 33385937 ~ 33386528 (-) |
| G1440781 | NA | other | downstream | 1378471 | 33381901 ~ 33382719 (-) |
| G1442443 | NA | other | upstream | 142128 | 34904082 ~ 34904616 (-) |
| LOC110493800 | LOC106564782 | other | upstream | 298245 | 35023723 ~ 35061975 (-) |
| G1442932 | rbbp9 | other | upstream | 466800 | 35228754 ~ 35232154 (-) |
| LOC110495171 | cssa12h2orf73 | other | upstream | 853750 | 35615229 ~ 35617995 (-) |
| LOC110493173 | slc29a1 | other | upstream | 1218027 | 35979898 ~ 36012831 (-) |
