G1442548


Basic Information

Item Value
gene id G1442548
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 35053035 ~ 35053468 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1651330
CAGCAATCTACAGTGAAAGCAGCTGAGTCCTCTGGTCCTTGTGTATtttcataaatatatatatacacacatacataaatatatatatttattttttgctacAAAATACCTAATGATTACAGCTTTGGGTGACACCCTGTCTCaaaaaccagtggtgtaaagtacttaagtaaaaatacctctttgggatcggtgtccctcccatgggatggttgagctaacgtaggctaatgcgattagcatgaggttgtaagtgaCACAAACacttcccaggacatagacatatctgatattggcagaaagcttaaattcttgttcatctaactgcactgttccatttacagtagctattagagtgaaagaataccatgctatggCAAAATcagaaaaacaccaagggggatgaatacttttgcaagcatGCAGTATATTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1651330 True 434 lncRNA 0.37 1 35053035 35053468

Neighbor

gene id symbol gene type direction distance location
LOC110493797 LOC106564786 coding upstream 104822 34923682 ~ 34948213 (+)
LOC110493796 LOC106564787 coding upstream 149833 34844350 ~ 34903202 (+)
LOC110493794 srsf7 coding upstream 250713 34787290 ~ 34802322 (+)
LOC110493791 NA coding upstream 272442 34776863 ~ 34780593 (+)
LOC110493792 LOC106564790 coding upstream 283210 34695397 ~ 34769825 (+)
LOC110493801 LOC106564780 coding downstream 69081 35122549 ~ 35132583 (+)
LOC110493802 LOC106564779 coding downstream 86128 35120694 ~ 35184540 (+)
rbbp9 rbbp9 coding downstream 175247 35228715 ~ 35232156 (+)
dzank1 dzank1 coding downstream 185428 35238129 ~ 35252453 (+)
LOC118940403 NA coding downstream 210727 35264195 ~ 35266310 (+)
G1442547 NA non-coding upstream 542 35052146 ~ 35052493 (+)
G1442525 NA non-coding upstream 29446 35023385 ~ 35023589 (+)
G1442518 NA non-coding upstream 35663 35017139 ~ 35017372 (+)
G1442447 NA non-coding upstream 145315 34907493 ~ 34907720 (+)
G1442446 NA non-coding upstream 145558 34907249 ~ 34907477 (+)
G1442573 NA non-coding downstream 37881 35091349 ~ 35101171 (+)
G1442579 NA non-coding downstream 49454 35102922 ~ 35103317 (+)
G1442640 NA non-coding downstream 163844 35217312 ~ 35217841 (+)
LOC110493778 LOC106564798 other upstream 750426 34290017 ~ 34317682 (+)
G1441315 NA other upstream 1076560 33976193 ~ 33976475 (+)
G1440890 LOC106564813 other upstream 1528501 33524199 ~ 33524534 (+)
G1440162 NA other upstream 2096978 32951800 ~ 32956057 (+)
G1440066 NA other upstream 2255603 32797098 ~ 32797432 (+)
G1443221 NA other downstream 620496 35673964 ~ 35744642 (+)
G1443251 NA other downstream 693404 35746872 ~ 35751790 (+)
LOC118940407 NA other downstream 1185476 36234292 ~ 36242642 (+)
G1443844 NA other downstream 1277767 36331235 ~ 36375374 (+)

Expression


Co-expression Network