G1442640



Basic Information


Item Value
gene id G1442640
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 35217312 ~ 35217841 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1651429
TGTGGATAATCATGCTCCCTTCATAAAATGAAGAGTTTGAATGCCTGTTACACTCCGGAATTATCAGGTCATTCATAAAAGACAAGATGCTTGGGTCAAGGCCAGGAACACAGGTTTAGGCACAGGCTGGCAAGCTTTTAAGAAACTGAGGAATCATTGCGTAAGACAAAAATCAGAAAGGCTAACTCTGATTATTATGTAACCGCTCTTTCTGATTGCAATGGGAGCCCGGCTAAATTCTGGAAAACTGTCATATCCCTGAATGGTTCTTCCTCCGAACTGCCATAACAAATGAATTCAGACACGGGACTCCTTACAGACAAAAATACCATCATTGATTTCTTTACTGTATCACCATTTTTTATTTCAGCGGGCTCTCTGTTTGAAATAACCTCTAAGCCTATTCACAATGATATTGGGCTGGATGCTGATAGGGGAAGCTTGATCAGAGAAATTAGAGTAACAGCCTTTCTTTTAGGCTATTTACAGAAAAAGTCCAGGATGCTTTGCTAGCAACAGACAACAAGAAT

Function


NR:

description
PREDICTED: uncharacterized protein LOC109204916

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1651429 True 530 lncRNA 0.40 1 35217312 35217841

Neighbor


gene id symbol gene type direction distance location
LOC110493802 LOC106564779 coding upstream 34073 35120694 ~ 35184540 (+)
LOC110493801 LOC106564780 coding upstream 84729 35122549 ~ 35132583 (+)
LOC110493797 LOC106564786 coding upstream 269099 34923682 ~ 34948213 (+)
LOC110493796 LOC106564787 coding upstream 314110 34844350 ~ 34903202 (+)
LOC110493794 srsf7 coding upstream 414990 34787290 ~ 34802322 (+)
rbbp9 rbbp9 coding downstream 10874 35228715 ~ 35232156 (+)
dzank1 dzank1 coding downstream 21055 35238129 ~ 35252453 (+)
LOC118940403 NA coding downstream 46354 35264195 ~ 35266310 (+)
rrbp1b rrbp1 coding downstream 62155 35279996 ~ 35311816 (+)
LOC110493172 NA coding downstream 151045 35368886 ~ 35392355 (+)
G1442579 NA non-coding upstream 113995 35102922 ~ 35103317 (+)
G1442573 NA non-coding upstream 116141 35091349 ~ 35101171 (+)
G1442548 NA non-coding upstream 163844 35053035 ~ 35053468 (+)
G1442547 NA non-coding upstream 164819 35052146 ~ 35052493 (+)
G1442852 NA non-coding downstream 60045 35277886 ~ 35278161 (+)
G1442855 NA non-coding downstream 62229 35280070 ~ 35280283 (+)
G1443054 NA non-coding downstream 214913 35432754 ~ 35432986 (+)
G1443057 NA non-coding downstream 219148 35436989 ~ 35437368 (+)
LOC110493778 LOC106564798 other upstream 914703 34290017 ~ 34317682 (+)
G1441315 NA other upstream 1240837 33976193 ~ 33976475 (+)
G1440890 LOC106564813 other upstream 1692778 33524199 ~ 33524534 (+)
G1440162 NA other upstream 2261255 32951800 ~ 32956057 (+)
G1443221 NA other downstream 456123 35673964 ~ 35744642 (+)
G1443251 NA other downstream 529031 35746872 ~ 35751790 (+)
LOC118940407 NA other downstream 1021103 36234292 ~ 36242642 (+)
G1443844 NA other downstream 1113394 36331235 ~ 36375374 (+)
LOC110493174 LOC106582647 other downstream 1274536 36492282 ~ 36557771 (+)

Expression



Co-expression Network