G1442852


Basic Information

Item Value
gene id G1442852
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 35277886 ~ 35278161 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1651682
TGTGAACcgatgcttcaggtccacaaaggcttTGTTGACAGCTGGAGACCATTTGAACGGTACCTTGGGGGAGGTGAGTGCCGAGAGTGGGGCCGCCAGGGTGCTGTAATCCCGAATGAACGGCGGTAGAAGTTTGCAAAACCAAGAAACTGTTGCAACTGCACCCTGGACAttggttgaggccaatccaccactgctttcacctttccaGGATTCATCTGAACACTGCCCTCAGCAATGACACATCCCAGAAAGGTGATAGAAGAGTggtggaac

Function

NR:

description
PREDICTED: uncharacterized protein LOC106604999

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1651682 True 276 lncRNA 0.52 1 35277886 35278161

Neighbor

gene id symbol gene type direction distance location
LOC118940403 NA coding upstream 11576 35264195 ~ 35266310 (+)
dzank1 dzank1 coding upstream 25433 35238129 ~ 35252453 (+)
rbbp9 rbbp9 coding upstream 45730 35228715 ~ 35232156 (+)
LOC110493802 LOC106564779 coding upstream 94647 35120694 ~ 35184540 (+)
LOC110493801 LOC106564780 coding upstream 145303 35122549 ~ 35132583 (+)
rrbp1b rrbp1 coding downstream 1835 35279996 ~ 35311816 (+)
LOC110493172 NA coding downstream 90725 35368886 ~ 35392355 (+)
bdh2 bdh2 coding downstream 377314 35655475 ~ 35677264 (+)
cfap58 cfap58 coding downstream 411633 35689794 ~ 35708517 (+)
aars2 aars2 coding downstream 438641 35716802 ~ 35741595 (+)
G1442640 NA non-coding upstream 60045 35217312 ~ 35217841 (+)
G1442579 NA non-coding upstream 174569 35102922 ~ 35103317 (+)
G1442573 NA non-coding upstream 176715 35091349 ~ 35101171 (+)
G1442855 NA non-coding downstream 1909 35280070 ~ 35280283 (+)
G1443054 NA non-coding downstream 154593 35432754 ~ 35432986 (+)
G1443057 NA non-coding downstream 158828 35436989 ~ 35437368 (+)
G1443074 NA non-coding downstream 167429 35445590 ~ 35447094 (+)
G1443097 LOC106565001 non-coding downstream 239605 35517766 ~ 35520282 (+)
LOC110493778 LOC106564798 other upstream 975277 34290017 ~ 34317682 (+)
G1441315 NA other upstream 1301411 33976193 ~ 33976475 (+)
G1440890 LOC106564813 other upstream 1753352 33524199 ~ 33524534 (+)
G1440162 NA other upstream 2321829 32951800 ~ 32956057 (+)
G1443221 NA other downstream 395803 35673964 ~ 35744642 (+)
G1443251 NA other downstream 468711 35746872 ~ 35751790 (+)
LOC118940407 NA other downstream 960783 36234292 ~ 36242642 (+)
G1443844 NA other downstream 1053074 36331235 ~ 36375374 (+)
LOC110493174 LOC106582647 other downstream 1214216 36492282 ~ 36557771 (+)

Expression


Co-expression Network