G1443054


Basic Information

Item Value
gene id G1443054
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 35432754 ~ 35432986 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1651903
tgtagctatttttcctaaagtatttatatttacttcggaaccggaacccctcaactgaagctagccagctaaccaccagctgtgctagcggtcttcagctaaccggtcatcagctaacctttagctcggaaagctctcgccagttcgaacaacgcgactctaaccagagcataacggacctatttatttttcatccccggattcccaccgcaaacggaacatttctcagctgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1651903 True 233 lncRNA 0.48 1 35432754 35432986

Neighbor

gene id symbol gene type direction distance location
LOC110493172 NA coding upstream 40399 35368886 ~ 35392355 (+)
rrbp1b rrbp1 coding upstream 120938 35279996 ~ 35311816 (+)
LOC118940403 NA coding upstream 166444 35264195 ~ 35266310 (+)
dzank1 dzank1 coding upstream 180301 35238129 ~ 35252453 (+)
rbbp9 rbbp9 coding upstream 200598 35228715 ~ 35232156 (+)
bdh2 bdh2 coding downstream 222489 35655475 ~ 35677264 (+)
cfap58 cfap58 coding downstream 256808 35689794 ~ 35708517 (+)
aars2 aars2 coding downstream 283816 35716802 ~ 35741595 (+)
LOC100135837 LOC100135837 coding downstream 343510 35776496 ~ 35793723 (+)
LOC110493821 LOC106565008 coding downstream 361359 35794345 ~ 35824095 (+)
G1442855 NA non-coding upstream 152471 35280070 ~ 35280283 (+)
G1442852 NA non-coding upstream 154593 35277886 ~ 35278161 (+)
G1442640 NA non-coding upstream 214913 35217312 ~ 35217841 (+)
LOC110493802 LOC106564779 non-coding upstream 248214 35120694 ~ 35184540 (+)
G1443057 NA non-coding downstream 4003 35436989 ~ 35437368 (+)
G1443074 NA non-coding downstream 12604 35445590 ~ 35447094 (+)
G1443097 LOC106565001 non-coding downstream 84780 35517766 ~ 35520282 (+)
G1443183 cssa12h2orf73 non-coding downstream 182427 35615413 ~ 35616152 (+)
G1443187 NA non-coding downstream 189029 35622015 ~ 35622455 (+)
LOC110493778 LOC106564798 other upstream 1130145 34290017 ~ 34317682 (+)
G1441315 NA other upstream 1456279 33976193 ~ 33976475 (+)
G1440890 LOC106564813 other upstream 1908220 33524199 ~ 33524534 (+)
G1440162 NA other upstream 2476697 32951800 ~ 32956057 (+)
G1443221 NA other downstream 240978 35673964 ~ 35744642 (+)
G1443251 NA other downstream 313886 35746872 ~ 35751790 (+)
LOC118940407 NA other downstream 805958 36234292 ~ 36242642 (+)
G1443844 NA other downstream 898249 36331235 ~ 36375374 (+)
LOC110493174 LOC106582647 other downstream 1059391 36492282 ~ 36557771 (+)

Expression


Co-expression Network