G1443347


Basic Information

Item Value
gene id G1443347
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 35958609 ~ 35958813 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1652227
aattagagagagcatacttaaattcacacaggacaccggataagacaggagaaatactccagatataacagactgaccctagccccccgacacaaactactgcagcataaatactggaggctgagacgggaggggtcaggagacactgtggccccatccgatgatacccccggacagggccaaacagacaggatataaccccacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1652227 True 205 lncRNA 0.51 1 35958609 35958813

Neighbor

gene id symbol gene type direction distance location
LOC110493827 tmem63b coding upstream 2962 35855110 ~ 35955647 (+)
LOC110493822 sde2 coding upstream 111149 35825533 ~ 35847460 (+)
LOC110493823 sde2 coding upstream 111152 35838159 ~ 35847457 (+)
LOC110493821 LOC106565008 coding upstream 134514 35794345 ~ 35824095 (+)
LOC100135837 LOC100135837 coding upstream 164886 35776496 ~ 35793723 (+)
LOC118940407 NA coding downstream 275479 36234292 ~ 36242642 (+)
LOC110493841 LOC106565021 coding downstream 451390 36410203 ~ 36417254 (+)
LOC110493174 LOC106582647 coding downstream 533469 36492282 ~ 36557771 (+)
mmp24 mmp24 coding downstream 615158 36573971 ~ 36641719 (+)
LOC118940420 NA coding downstream 701535 36660348 ~ 36665818 (+)
G1443346 NA non-coding upstream 64 35958255 ~ 35958545 (+)
G1443247 NA non-coding upstream 721 35957566 ~ 35957888 (+)
G1443197 NA non-coding upstream 319165 35638494 ~ 35639444 (+)
G1443198 NA non-coding upstream 321878 35633485 ~ 35636731 (+)
G1443187 NA non-coding upstream 336154 35622015 ~ 35622455 (+)
G1443349 NA non-coding downstream 3398 35962211 ~ 35962441 (+)
G1443352 NA non-coding downstream 10777 35969590 ~ 35969957 (+)
G1443353 NA non-coding downstream 12104 35970917 ~ 35971209 (+)
G1443356 NA non-coding downstream 15730 35974543 ~ 35974768 (+)
G1443357 NA non-coding downstream 16772 35975585 ~ 35975806 (+)
G1443251 NA other upstream 206819 35746872 ~ 35751790 (+)
G1443221 NA other upstream 213967 35673964 ~ 35744642 (+)
LOC110493802 LOC106564779 other upstream 774069 35120694 ~ 35184540 (+)
LOC110493778 LOC106564798 other upstream 1656000 34290017 ~ 34317682 (+)
G1441315 NA other upstream 1982134 33976193 ~ 33976475 (+)
G1443844 NA other downstream 372422 36331235 ~ 36375374 (+)
G1444198 LOC106565031 other downstream 898753 36857566 ~ 36861009 (+)
G1444933 NA other downstream 1443384 37402197 ~ 37402492 (+)

Expression


Co-expression Network