G1443352


Basic Information

Item Value
gene id G1443352
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 35969590 ~ 35969957 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1652232
caaaactactgtcttgtacacagtgtaaggggataaagaatatgtacataaggatatatgaatgagtgatggtacagagcagcataggcaagatacagtagatggtatcgagtacagtatgtaaacaaagtggcatagttaaagtggctagtgatacatgtattacataaggatacagtcgatgatatagagtacagtgtgcatatgagatgaataatgtagggtaagtaacattatataaggtagcattgtttaaagtggctagtgatatatttacatcatttcccatcaattcccattattaaagtggctggagttgagtcagtgtcagtgtgttggcagcagccactcaatgttagtggtggctg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1652232 True 368 lncRNA 0.38 1 35969590 35969957

Neighbor

gene id symbol gene type direction distance location
LOC110493827 tmem63b coding upstream 13943 35855110 ~ 35955647 (+)
LOC110493822 sde2 coding upstream 122130 35825533 ~ 35847460 (+)
LOC110493823 sde2 coding upstream 122133 35838159 ~ 35847457 (+)
LOC110493821 LOC106565008 coding upstream 145495 35794345 ~ 35824095 (+)
LOC100135837 LOC100135837 coding upstream 175867 35776496 ~ 35793723 (+)
LOC118940407 NA coding downstream 264335 36234292 ~ 36242642 (+)
LOC110493841 LOC106565021 coding downstream 440246 36410203 ~ 36417254 (+)
LOC110493174 LOC106582647 coding downstream 522325 36492282 ~ 36557771 (+)
mmp24 mmp24 coding downstream 604014 36573971 ~ 36641719 (+)
LOC118940420 NA coding downstream 690391 36660348 ~ 36665818 (+)
G1443349 NA non-coding upstream 7149 35962211 ~ 35962441 (+)
G1443347 NA non-coding upstream 10777 35958609 ~ 35958813 (+)
G1443346 NA non-coding upstream 11045 35958255 ~ 35958545 (+)
G1443247 NA non-coding upstream 11702 35957566 ~ 35957888 (+)
G1443197 NA non-coding upstream 330146 35638494 ~ 35639444 (+)
G1443353 NA non-coding downstream 960 35970917 ~ 35971209 (+)
G1443356 NA non-coding downstream 4586 35974543 ~ 35974768 (+)
G1443357 NA non-coding downstream 5628 35975585 ~ 35975806 (+)
G1443358 NA non-coding downstream 10049 35980006 ~ 36019231 (+)
G1443361 NA non-coding downstream 12350 35982307 ~ 36019453 (+)
G1443251 NA other upstream 217800 35746872 ~ 35751790 (+)
G1443221 NA other upstream 224948 35673964 ~ 35744642 (+)
LOC110493802 LOC106564779 other upstream 785050 35120694 ~ 35184540 (+)
LOC110493778 LOC106564798 other upstream 1666981 34290017 ~ 34317682 (+)
G1441315 NA other upstream 1993115 33976193 ~ 33976475 (+)
G1443844 NA other downstream 361278 36331235 ~ 36375374 (+)
G1444198 LOC106565031 other downstream 887609 36857566 ~ 36861009 (+)
G1444933 NA other downstream 1432240 37402197 ~ 37402492 (+)

Expression


Co-expression Network