G1443353


Basic Information

Item Value
gene id G1443353
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 35970917 ~ 35971209 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1652233
gtattcctcttgtccagatgggttagggcagtgtgcagtgtggttgagattgcattgtctgtggacctatttgggcggtaagcaaattggagtgggtctagggtgtcaggtagggcggaggtgatatggtccttgactagtctctcaaagcacttcatgatgacggaagtgagtgctacggggcggtagtcgtttagctccgttaccttagctttcttgggaacaggaacaatggtagccctcttgaagcatgtgggaacagcagactggtatagggattgattgaatatgtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1652233 True 293 lncRNA 0.49 1 35970917 35971209

Neighbor

gene id symbol gene type direction distance location
LOC110493827 tmem63b coding upstream 15270 35855110 ~ 35955647 (+)
LOC110493822 sde2 coding upstream 123457 35825533 ~ 35847460 (+)
LOC110493823 sde2 coding upstream 123460 35838159 ~ 35847457 (+)
LOC110493821 LOC106565008 coding upstream 146822 35794345 ~ 35824095 (+)
LOC100135837 LOC100135837 coding upstream 177194 35776496 ~ 35793723 (+)
LOC118940407 NA coding downstream 263083 36234292 ~ 36242642 (+)
LOC110493841 LOC106565021 coding downstream 438994 36410203 ~ 36417254 (+)
LOC110493174 LOC106582647 coding downstream 521073 36492282 ~ 36557771 (+)
mmp24 mmp24 coding downstream 602762 36573971 ~ 36641719 (+)
LOC118940420 NA coding downstream 689139 36660348 ~ 36665818 (+)
G1443352 NA non-coding upstream 960 35969590 ~ 35969957 (+)
G1443349 NA non-coding upstream 8476 35962211 ~ 35962441 (+)
G1443347 NA non-coding upstream 12104 35958609 ~ 35958813 (+)
G1443346 NA non-coding upstream 12372 35958255 ~ 35958545 (+)
G1443247 NA non-coding upstream 13029 35957566 ~ 35957888 (+)
G1443356 NA non-coding downstream 3334 35974543 ~ 35974768 (+)
G1443357 NA non-coding downstream 4376 35975585 ~ 35975806 (+)
G1443358 NA non-coding downstream 8797 35980006 ~ 36019231 (+)
G1443361 NA non-coding downstream 11098 35982307 ~ 36019453 (+)
G1443369 NA non-coding downstream 19941 35991150 ~ 36030653 (+)
G1443251 NA other upstream 219127 35746872 ~ 35751790 (+)
G1443221 NA other upstream 226275 35673964 ~ 35744642 (+)
LOC110493802 LOC106564779 other upstream 786377 35120694 ~ 35184540 (+)
LOC110493778 LOC106564798 other upstream 1668308 34290017 ~ 34317682 (+)
G1441315 NA other upstream 1994442 33976193 ~ 33976475 (+)
G1443844 NA other downstream 360026 36331235 ~ 36375374 (+)
G1444198 LOC106565031 other downstream 886357 36857566 ~ 36861009 (+)
G1444933 NA other downstream 1430988 37402197 ~ 37402492 (+)

Expression


Co-expression Network