Gene
RNA
| Item | Value |
|---|---|
| gene id | G1443356 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 35974543 ~ 35974768 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1652236 | True | 226 | lncRNA | 0.46 | 1 | 35974543 | 35974768 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493827 | tmem63b | coding | upstream | 18896 | 35855110 ~ 35955647 (+) |
| LOC110493822 | sde2 | coding | upstream | 127083 | 35825533 ~ 35847460 (+) |
| LOC110493823 | sde2 | coding | upstream | 127086 | 35838159 ~ 35847457 (+) |
| LOC110493821 | LOC106565008 | coding | upstream | 150448 | 35794345 ~ 35824095 (+) |
| LOC100135837 | LOC100135837 | coding | upstream | 180820 | 35776496 ~ 35793723 (+) |
| LOC118940407 | NA | coding | downstream | 259524 | 36234292 ~ 36242642 (+) |
| LOC110493841 | LOC106565021 | coding | downstream | 435435 | 36410203 ~ 36417254 (+) |
| LOC110493174 | LOC106582647 | coding | downstream | 517514 | 36492282 ~ 36557771 (+) |
| mmp24 | mmp24 | coding | downstream | 599203 | 36573971 ~ 36641719 (+) |
| LOC118940420 | NA | coding | downstream | 685580 | 36660348 ~ 36665818 (+) |
| G1443353 | NA | non-coding | upstream | 3334 | 35970917 ~ 35971209 (+) |
| G1443352 | NA | non-coding | upstream | 4586 | 35969590 ~ 35969957 (+) |
| G1443349 | NA | non-coding | upstream | 12102 | 35962211 ~ 35962441 (+) |
| G1443347 | NA | non-coding | upstream | 15730 | 35958609 ~ 35958813 (+) |
| G1443346 | NA | non-coding | upstream | 15998 | 35958255 ~ 35958545 (+) |
| G1443357 | NA | non-coding | downstream | 817 | 35975585 ~ 35975806 (+) |
| G1443358 | NA | non-coding | downstream | 5238 | 35980006 ~ 36019231 (+) |
| G1443361 | NA | non-coding | downstream | 7539 | 35982307 ~ 36019453 (+) |
| G1443369 | NA | non-coding | downstream | 16382 | 35991150 ~ 36030653 (+) |
| G1443370 | slc29a1 | non-coding | downstream | 27903 | 36002671 ~ 36003823 (+) |
| G1443251 | NA | other | upstream | 222753 | 35746872 ~ 35751790 (+) |
| G1443221 | NA | other | upstream | 229901 | 35673964 ~ 35744642 (+) |
| LOC110493802 | LOC106564779 | other | upstream | 790003 | 35120694 ~ 35184540 (+) |
| LOC110493778 | LOC106564798 | other | upstream | 1671934 | 34290017 ~ 34317682 (+) |
| G1441315 | NA | other | upstream | 1998068 | 33976193 ~ 33976475 (+) |
| G1443844 | NA | other | downstream | 356467 | 36331235 ~ 36375374 (+) |
| G1444198 | LOC106565031 | other | downstream | 882798 | 36857566 ~ 36861009 (+) |
| G1444933 | NA | other | downstream | 1427429 | 37402197 ~ 37402492 (+) |
