G1443357


Basic Information

Item Value
gene id G1443357
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 35975585 ~ 35975806 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1652237
CTGGTCCAGGCGAGTGGGCTGCCGGCCGACTGCAACTGTGGTTGGTATTACATCTGTCAGCTTCTCTCTCCCAGCCAGTTACTTTTGGTCCAGTCCATTCCAACTTTACCTGGGCTCCGcccctttcccatctctgttAACTCTTGGGGAtagtgagacgctagcgtctcaagtggccaatagcctcgggaaatgcatagcgccaaattcaaataaaacgcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1652237 True 222 lncRNA 0.53 1 35975585 35975806

Neighbor

gene id symbol gene type direction distance location
LOC110493827 tmem63b coding upstream 19938 35855110 ~ 35955647 (+)
LOC110493822 sde2 coding upstream 128125 35825533 ~ 35847460 (+)
LOC110493823 sde2 coding upstream 128128 35838159 ~ 35847457 (+)
LOC110493821 LOC106565008 coding upstream 151490 35794345 ~ 35824095 (+)
LOC100135837 LOC100135837 coding upstream 181862 35776496 ~ 35793723 (+)
LOC118940407 NA coding downstream 258486 36234292 ~ 36242642 (+)
LOC110493841 LOC106565021 coding downstream 434397 36410203 ~ 36417254 (+)
LOC110493174 LOC106582647 coding downstream 516476 36492282 ~ 36557771 (+)
mmp24 mmp24 coding downstream 598165 36573971 ~ 36641719 (+)
LOC118940420 NA coding downstream 684542 36660348 ~ 36665818 (+)
G1443356 NA non-coding upstream 817 35974543 ~ 35974768 (+)
G1443353 NA non-coding upstream 4376 35970917 ~ 35971209 (+)
G1443352 NA non-coding upstream 5628 35969590 ~ 35969957 (+)
G1443349 NA non-coding upstream 13144 35962211 ~ 35962441 (+)
G1443347 NA non-coding upstream 16772 35958609 ~ 35958813 (+)
G1443358 NA non-coding downstream 4200 35980006 ~ 36019231 (+)
G1443361 NA non-coding downstream 6501 35982307 ~ 36019453 (+)
G1443369 NA non-coding downstream 15344 35991150 ~ 36030653 (+)
G1443370 slc29a1 non-coding downstream 26865 36002671 ~ 36003823 (+)
G1443400 NA non-coding downstream 144094 36119900 ~ 36120323 (+)
G1443251 NA other upstream 223795 35746872 ~ 35751790 (+)
G1443221 NA other upstream 230943 35673964 ~ 35744642 (+)
LOC110493802 LOC106564779 other upstream 791045 35120694 ~ 35184540 (+)
LOC110493778 LOC106564798 other upstream 1672976 34290017 ~ 34317682 (+)
G1441315 NA other upstream 1999110 33976193 ~ 33976475 (+)
G1443844 NA other downstream 355429 36331235 ~ 36375374 (+)
G1444198 LOC106565031 other downstream 881760 36857566 ~ 36861009 (+)
G1444933 NA other downstream 1426391 37402197 ~ 37402492 (+)

Expression


Co-expression Network