G1443415


Basic Information

Item Value
gene id G1443415
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 36166799 ~ 36167050 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1652308
agtctggttcaggcatgaaacacaaccaacaagaatccgacaaggacaggaacaaaaacagagagagatataggggactaatcagagggaaaaggggaacaggtgggagaaggggtgacgaggtagtcaagaggagacaaggaacagctgggggaaagcgggggagaaaaggtaacctaacaacgaccagcagagggagacagggtgaagggaaaggacagagacaagacacaacatgacagtacatgacag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1652308 True 252 lncRNA 0.50 1 36166799 36167050

Neighbor

gene id symbol gene type direction distance location
LOC110493827 tmem63b coding upstream 211152 35855110 ~ 35955647 (+)
LOC110493822 sde2 coding upstream 319339 35825533 ~ 35847460 (+)
LOC110493823 sde2 coding upstream 319342 35838159 ~ 35847457 (+)
LOC110493821 LOC106565008 coding upstream 342704 35794345 ~ 35824095 (+)
LOC100135837 LOC100135837 coding upstream 373076 35776496 ~ 35793723 (+)
LOC118940407 NA coding downstream 67242 36234292 ~ 36242642 (+)
LOC110493841 LOC106565021 coding downstream 243153 36410203 ~ 36417254 (+)
LOC110493174 LOC106582647 coding downstream 325232 36492282 ~ 36557771 (+)
mmp24 mmp24 coding downstream 406921 36573971 ~ 36641719 (+)
LOC118940420 NA coding downstream 493298 36660348 ~ 36665818 (+)
G1443414 LOC106565014 non-coding upstream 4554 36161028 ~ 36162245 (+)
G1443403 NA non-coding upstream 44335 36122104 ~ 36122464 (+)
G1443402 NA non-coding upstream 44762 36121440 ~ 36122037 (+)
G1443401 NA non-coding upstream 45764 36120719 ~ 36121035 (+)
G1443400 NA non-coding upstream 46476 36119900 ~ 36120323 (+)
G1443420 NA non-coding downstream 10945 36177995 ~ 36178210 (+)
G1443421 NA non-coding downstream 12453 36179503 ~ 36179871 (+)
G1443424 NA non-coding downstream 26154 36193204 ~ 36213034 (+)
G1443429 NA non-coding downstream 57619 36224669 ~ 36225530 (+)
G1443251 NA other upstream 415009 35746872 ~ 35751790 (+)
G1443221 NA other upstream 422157 35673964 ~ 35744642 (+)
LOC110493802 LOC106564779 other upstream 982259 35120694 ~ 35184540 (+)
LOC110493778 LOC106564798 other upstream 1864190 34290017 ~ 34317682 (+)
G1441315 NA other upstream 2190324 33976193 ~ 33976475 (+)
G1443844 NA other downstream 164185 36331235 ~ 36375374 (+)
G1444198 LOC106565031 other downstream 690516 36857566 ~ 36861009 (+)
G1444933 NA other downstream 1235147 37402197 ~ 37402492 (+)

Expression


Co-expression Network