G1443844


Basic Information

Item Value
gene id G1443844
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 36331235 ~ 36375374 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1652778
cagagagaaagaggcagagagaaagtggcagagagaaagtggcagagagaaagtggcagagagaaagtggcagagagaaagaggcagagagaaagagacagagagagaacgagagaaaaagagacagagagaaagagacagagagaaagtggcagagagaaagtggcagagagaaagtggcagagagaaagaggcagagagaaagagagagagacagagagaaagagacagagagaaagagacagagagatagagagaaagaggcagagagaaagaggcagagagaaagagacagagagaaagagacagagagaaagaggcagagagaaagtggcagagagaaagtggcagagagaaagtggcagagagaaagaggcagagagaaagagagagagacagagacagagagaaagagacagagagaaagagacagagagacagagacagagagaaagagacaaagagaaagaggcagagataaagaggcagagagaaatagagaaagagaaagaggcagagagaaagagacagagagaaagagacagagagaaagagacaaagagaaagagacagagagatagaggcagagagaaatagagaaagagaaagaggcagagacagagagaaagagacagagagaaagagacagagagaaagagacaaagagaaagaggcagagagaaagagacagagacagagagaaagagacagagacagagagaaagagacagagagaaagagacagagagaaagagacaaagagaaagagacagagagatagaggcagagagaaagaggcagagagaaatagagaaagagaaagaggcagagagaaagagacagagacagagagaaagagacagagacagagagaaagagacagagagaaagagacagagagaaagagagaaagaggcagagagaaagaggcagagagatatagagaaagaggtagagagaaagagagacagagaggcagagagaaagaggcagagagaaagagacagagagaaagagagacagaggaagagacaagagaaagagacagagagaaagaggcagagagatatagagaaagaggtagagagaaagagagacagagaggcagagagaaagaggcagagagaaagagacagagagatagagggaaagaggcagagagaaagaggcagagagaaagtggcagagagaaagtggcagagagaaagtggcagagagaaagaggcagagagaaagtggcagagagaaagaggcagagagaaagagagagagacagagacagagagaaagagacagagagaaagagacagagagatagagagaaagaggcagagagaaagaggcagagagaaagagacagagagaaagagacagagacagagagaaagagacagagacagagagaaagagacagagagaaagagacagagagaaagagacaaagagaaagaggcagagagaaagaggcagagagaaatagagaaagagaaagaggcagagagaaagagacagagagaaagagacagagagaaagagacaaagagaaagagacagagagatagaggcagagagaaagaggcagagagaaatagaaaaagagaaagaggcagagacagagagaaagagacagagagaaagagacagagagatagagagaaagaggcagagagaaagaggcagagagaaagagacagagagaaagagacagagacagagagaaagagacagagacagagagaaagagacagagagaaagagacaaagagaaagaggcagagagaaagaggcagagagaaatagagaaagagaaagaggcagagagaaagagacagagagaaagagacaaagagaaagagacagagagatagaggcagagagaaagaggcagagagaaatagagaaagagaaagaggcagagacagagagaaagagacagagagaaagagacagagagatagagggaaagaggcagagagaaagagacagagagaaagagagaaagaggcaaagagaaagagacagagagaaagagagaaagagaacgaggccgagagaaagagacagatagaaagagacagagagaaagagagaaagaggcagagagaaagagacagagagaaagagagaaagaggcaaagagaaagagacagagagaaagaggcagggagaaagaggcagggagaaagaggcagggagaaagaggcagagagaaagagacagagagaaagagagaaagaggcagagagaaagaggcagagagaaagaggcagagagaaagaggcagagagaaagaggcagagagacagagagatagagaaagagagaaagaggcaaggagaaagagacagagagaaagagacagagagacagagagaaagagagaaagagagagagagagagagagagagagagagacagagacagagacagagaaagagaaagagaaagaaagagagagagaaagagacagagacagagagagacaaagaggcagagagacagagacagagagagacaaagaggcagagagaaagaggcagagagaaagaggcagagagaacgaaagaggcagagagaacgaaagagacagagagaacgaaagagacagagagaacgaaagagacagagagagagagacagagagagagagaacgaaagagacagagaacgaaagagacagagagaacgaaagagacagagagaacgaaagagacagagagaacgaaagagacagagagaacgaaatagacagagagaacgaaagagacagagagaacgaaagagacagagagaatgaaagagacagagagaacgacagagagaaagaaagagacagagagaaagagacaaagaggcagagacaaagagacagagaaagaggcagagataaagaggcagggagaaagaggcagggagaaagaggcagggagaaagaggcagagagaaagaggcagagagaaagagacagagagaaagaaagagatagagagaaagagagagagagaaagagagagagagaaagagacagagagaaagagagagatagagagaaagagagagagagaaagagagagagagaaagagagagagaaagagagagagaaagagacagagagacagagagagagacagagaacgagagacagagaaagagagacagaatgaggcagagagaaagaggcagagagaaagagagaaagaggcagagagaaggaggcagagagaaagaaagagagaaagaaagaaagagagaaagagacagagaggcagagagaaagaggcagagagtaagagacagagagagagagaacgaaagagacagagaacgaaagagacagagagaacgaaagagacagagagaacgaaagagacagagataacgaaagagacagagagaacgaaagagacagagagaacgaaagagacagagagaacgaaagagacagagagaatgaaagagacagagagaacgagagagagaaagaaagagacagagagaaagaaagaaacagagagaaagaaagagatagagagaaagagacagagagacagagagagagacagagaacgagagacagagaaagagagacagaatgaggcagagagaaagaggcagagagaaagagagaaggaggcagagagaaggaggcagagagaaagaaagagagaaagaaagaaagagagaaagagacagagaggcagagagaaagaggcagagagtaagagacagagagagagagaacgaaagagacagagaacgaaagagacagagagaacgaaagagacagagagaacgaaagagacagagataacgaaagagacagagagaacgaaagagacagagagaacgaaagagacagagagaatgaaagagacagagagaacgagagagagaaagaaagagacagagagaaagaaagaaacagagagaaagaaagagatagagagaaagagacaaagaggcagagagaaatagagaaagagaaagaggcagagagaaagagacagagacagagcgaaagagacagagacagagagaaagagacagagagaaagagacagagagaaagagacaaagagaaagagacagagagatagaggcagagagaaagaggcagagagaaagagaaagagaaagagacagagagaaagagacagagagaaagagacagagagaaagagagaaagaggcagagagaaagaggcagagagatatagagaaagaggtagagagaaagagacagagagaaagagacagagagatagagagaaagaggcagagagaaaattgagcagctgctgaaaaatgagctcctgtatatattgagatttaaatggtttttttagagtgaagtacatcgaaaaaatcaaaagaaaactgcaagactcaatagaagacaatacaagcaacaaaccaaaaagacaggattttgaaaaagtaactatttttcataaaattatacagttatcttagctagctgaattgttagctgaattgtttacatgttgctaagcagttgctagggactctcctggaagaagctagctagcttacaaagaataacaaaaaaatatctagttaacagaagaaaggaagacaaaataaggacaaaataaggacaaaagaaaaaggaaaagaaaaaaggacaacaaagtgaaacagtcctctgaagaaacaagagaccagtatacaagaaacagcacttctattgcaacattgtagccaacatcaccagcgttgctatggaaattgtttacccaccagacatccaaacagagaaagctaagaaaagtttcaaaggtttgttgatgggacagaaccatgaatgcctgtttgcagatcttaccagttacaaaacaagagcaaatttaatttttaataccaatcgagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1652778 True 4892 TUCP 0.43 3 36331235 36375374

Neighbor

gene id symbol gene type direction distance location
LOC118940407 NA coding upstream 88718 36234292 ~ 36242642 (+)
LOC110493827 tmem63b coding upstream 375588 35855110 ~ 35955647 (+)
LOC110493822 sde2 coding upstream 483775 35825533 ~ 35847460 (+)
LOC110493823 sde2 coding upstream 483778 35838159 ~ 35847457 (+)
LOC110493821 LOC106565008 coding upstream 507140 35794345 ~ 35824095 (+)
LOC110493841 LOC106565021 coding downstream 34829 36410203 ~ 36417254 (+)
LOC110493174 LOC106582647 coding downstream 116908 36492282 ~ 36557771 (+)
mmp24 mmp24 coding downstream 198597 36573971 ~ 36641719 (+)
LOC118940420 NA coding downstream 284974 36660348 ~ 36665818 (+)
if6 if6 coding downstream 295404 36670778 ~ 36676746 (+)
G1443842 NA non-coding upstream 27875 36303159 ~ 36303360 (+)
G1443429 NA non-coding upstream 105705 36224669 ~ 36225530 (+)
G1443424 NA non-coding upstream 118201 36193204 ~ 36213034 (+)
G1443421 NA non-coding upstream 151364 36179503 ~ 36179871 (+)
G1443875 NA non-coding downstream 10500 36385874 ~ 36386365 (+)
G1444006 NA non-coding downstream 107763 36483137 ~ 36483371 (+)
G1444105 NA non-coding downstream 276137 36651511 ~ 36651713 (+)
G1444112 NA non-coding downstream 304903 36680277 ~ 36680877 (+)
G1444118 NA non-coding downstream 319086 36694460 ~ 36694733 (+)
G1443251 NA other upstream 579445 35746872 ~ 35751790 (+)
G1443221 NA other upstream 586593 35673964 ~ 35744642 (+)
LOC110493802 LOC106564779 other upstream 1146695 35120694 ~ 35184540 (+)
LOC110493778 LOC106564798 other upstream 2028626 34290017 ~ 34317682 (+)
G1444198 LOC106565031 other downstream 482192 36857566 ~ 36861009 (+)
G1444933 NA other downstream 1026823 37402197 ~ 37402492 (+)
chd6 NA other downstream 1059401 37406926 ~ 37514061 (+)
rbl1 rbl1 other downstream 1210506 37538220 ~ 37588797 (+)

Expression


Co-expression Network