G1444120


Basic Information

Item Value
gene id G1444120
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 36695794 ~ 36696225 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1653092
gggtcagtctgacATATCtgaagtatttctcctgtcttacctggtgtcctgtgtgaatttaagtatgctccctctaattttctttctctttctctttctccctctcttctctcagaggacctgagtcttaggaccatgcctcaggactgcctggcctgatgactcattgctgtccccagtccacctggttgtgctgctgctccagtttcaactgttctgcctgcagctacggaaccctgacctgttcatcgcacctgctgtctctatctctgaatgattggctatgaaaagccatctgacatttactcctgaggtgctgacctgttgcaccctctacaaccactgtgattattattatttgaccctgctggtcatctatgaacgtttgaacatcttggccatgtactgttataatctccacccggcacagcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1653092 True 432 lncRNA 0.48 1 36695794 36696225

Neighbor

gene id symbol gene type direction distance location
if6 if6 coding upstream 19048 36670778 ~ 36676746 (+)
LOC118940420 NA coding upstream 29976 36660348 ~ 36665818 (+)
mmp24 mmp24 coding upstream 54075 36573971 ~ 36641719 (+)
LOC110493174 LOC106582647 coding upstream 154716 36492282 ~ 36557771 (+)
LOC110493841 LOC106565021 coding upstream 278540 36410203 ~ 36417254 (+)
LOC110493845 LOC106565027 coding downstream 27709 36723934 ~ 36769782 (+)
LOC110493846 NA coding downstream 99614 36795839 ~ 36802299 (+)
rbpjl LOC106565033 coding downstream 254946 36951171 ~ 36978642 (+)
LOC110493852 spag1 coding downstream 333356 37029581 ~ 37033137 (+)
LOC118940422 NA coding downstream 415027 37111252 ~ 37112362 (+)
G1444118 NA non-coding upstream 1061 36694460 ~ 36694733 (+)
G1444112 NA non-coding upstream 14917 36680277 ~ 36680877 (+)
G1444105 NA non-coding upstream 44081 36651511 ~ 36651713 (+)
G1444006 NA non-coding upstream 212423 36483137 ~ 36483371 (+)
G1443875 NA non-coding upstream 309429 36385874 ~ 36386365 (+)
G1444122 NA non-coding downstream 4848 36701073 ~ 36701313 (+)
G1444123 NA non-coding downstream 5957 36702182 ~ 36702491 (+)
G1444152 NA non-coding downstream 84309 36780534 ~ 36780976 (+)
G1444160 NA non-coding downstream 101544 36797769 ~ 36798216 (+)
G1444196 NA non-coding downstream 158429 36854654 ~ 36855071 (+)
G1443844 NA other upstream 320420 36331235 ~ 36375374 (+)
LOC118940407 NA other upstream 455069 36234292 ~ 36242642 (+)
G1443251 NA other upstream 944004 35746872 ~ 35751790 (+)
G1443221 NA other upstream 951152 35673964 ~ 35744642 (+)
G1444198 LOC106565031 other downstream 161341 36857566 ~ 36861009 (+)
G1444933 NA other downstream 705972 37402197 ~ 37402492 (+)
chd6 NA other downstream 738550 37406926 ~ 37514061 (+)
rbl1 rbl1 other downstream 889655 37538220 ~ 37588797 (+)
G1446149 NA other downstream 1612904 38309129 ~ 38310864 (+)

Expression


Co-expression Network