G1444160


Basic Information

Item Value
gene id G1444160
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 36797769 ~ 36798216 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1653134
aaagttcaattttggtttcaactgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacgacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctccatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttggggtgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggac

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1653134 True 448 lncRNA 0.44 1 36797769 36798216

Neighbor

gene id symbol gene type direction distance location
LOC110493845 LOC106565027 coding upstream 27987 36723934 ~ 36769782 (+)
if6 if6 coding upstream 121023 36670778 ~ 36676746 (+)
LOC118940420 NA coding upstream 131951 36660348 ~ 36665818 (+)
mmp24 mmp24 coding upstream 156050 36573971 ~ 36641719 (+)
LOC110493174 LOC106582647 coding upstream 256691 36492282 ~ 36557771 (+)
rbpjl LOC106565033 coding downstream 152955 36951171 ~ 36978642 (+)
LOC110493852 spag1 coding downstream 231365 37029581 ~ 37033137 (+)
LOC118940422 NA coding downstream 313036 37111252 ~ 37112362 (+)
LOC118940423 NA coding downstream 497106 37295322 ~ 37301815 (+)
LOC118940100 NA coding downstream 504666 37302882 ~ 37307944 (+)
G1444152 NA non-coding upstream 16793 36780534 ~ 36780976 (+)
G1444123 NA non-coding upstream 95278 36702182 ~ 36702491 (+)
G1444122 NA non-coding upstream 96456 36701073 ~ 36701313 (+)
G1444120 NA non-coding upstream 101544 36695794 ~ 36696225 (+)
G1444118 NA non-coding upstream 103036 36694460 ~ 36694733 (+)
G1444196 NA non-coding downstream 56438 36854654 ~ 36855071 (+)
G1444197 NA non-coding downstream 57253 36855469 ~ 36855805 (+)
G1444199 NA non-coding downstream 64268 36862484 ~ 36862699 (+)
G1444200 NA non-coding downstream 65282 36863498 ~ 36863844 (+)
G1444205 NA non-coding downstream 71274 36869490 ~ 36869764 (+)
G1443844 NA other upstream 422395 36331235 ~ 36375374 (+)
LOC118940407 NA other upstream 557044 36234292 ~ 36242642 (+)
G1443251 NA other upstream 1045979 35746872 ~ 35751790 (+)
G1443221 NA other upstream 1053127 35673964 ~ 35744642 (+)
G1444198 LOC106565031 other downstream 59350 36857566 ~ 36861009 (+)
G1444933 NA other downstream 603981 37402197 ~ 37402492 (+)
chd6 NA other downstream 636559 37406926 ~ 37514061 (+)
rbl1 rbl1 other downstream 787664 37538220 ~ 37588797 (+)
G1446149 NA other downstream 1510913 38309129 ~ 38310864 (+)

Expression


Co-expression Network