Gene
RNA
| Item | Value |
|---|---|
| gene id | G1444197 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 36855469 ~ 36855805 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1653173 | True | 337 | lncRNA | 0.40 | 1 | 36855469 | 36855805 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493846 | NA | coding | upstream | 53170 | 36795839 ~ 36802299 (+) |
| LOC110493845 | LOC106565027 | coding | upstream | 85687 | 36723934 ~ 36769782 (+) |
| if6 | if6 | coding | upstream | 178723 | 36670778 ~ 36676746 (+) |
| LOC118940420 | NA | coding | upstream | 189651 | 36660348 ~ 36665818 (+) |
| mmp24 | mmp24 | coding | upstream | 213750 | 36573971 ~ 36641719 (+) |
| rbpjl | LOC106565033 | coding | downstream | 95366 | 36951171 ~ 36978642 (+) |
| LOC110493852 | spag1 | coding | downstream | 173776 | 37029581 ~ 37033137 (+) |
| LOC118940422 | NA | coding | downstream | 255447 | 37111252 ~ 37112362 (+) |
| LOC118940423 | NA | coding | downstream | 439517 | 37295322 ~ 37301815 (+) |
| LOC118940100 | NA | coding | downstream | 447077 | 37302882 ~ 37307944 (+) |
| G1444196 | NA | non-coding | upstream | 398 | 36854654 ~ 36855071 (+) |
| G1444160 | NA | non-coding | upstream | 57253 | 36797769 ~ 36798216 (+) |
| G1444152 | NA | non-coding | upstream | 74493 | 36780534 ~ 36780976 (+) |
| G1444123 | NA | non-coding | upstream | 152978 | 36702182 ~ 36702491 (+) |
| G1444122 | NA | non-coding | upstream | 154156 | 36701073 ~ 36701313 (+) |
| G1444199 | NA | non-coding | downstream | 6679 | 36862484 ~ 36862699 (+) |
| G1444200 | NA | non-coding | downstream | 7693 | 36863498 ~ 36863844 (+) |
| G1444205 | NA | non-coding | downstream | 13685 | 36869490 ~ 36869764 (+) |
| G1444209 | NA | non-coding | downstream | 21299 | 36877104 ~ 36877766 (+) |
| G1444227 | NA | non-coding | downstream | 55825 | 36911630 ~ 36914019 (+) |
| LOC110493174 | LOC106582647 | other | upstream | 297698 | 36492282 ~ 36557771 (+) |
| G1443844 | NA | other | upstream | 480095 | 36331235 ~ 36375374 (+) |
| LOC118940407 | NA | other | upstream | 614744 | 36234292 ~ 36242642 (+) |
| G1443251 | NA | other | upstream | 1103679 | 35746872 ~ 35751790 (+) |
| G1443221 | NA | other | upstream | 1110827 | 35673964 ~ 35744642 (+) |
| G1444198 | LOC106565031 | other | downstream | 1761 | 36857566 ~ 36861009 (+) |
| G1444933 | NA | other | downstream | 546392 | 37402197 ~ 37402492 (+) |
| chd6 | NA | other | downstream | 578970 | 37406926 ~ 37514061 (+) |
| rbl1 | rbl1 | other | downstream | 730075 | 37538220 ~ 37588797 (+) |
| G1446149 | NA | other | downstream | 1453324 | 38309129 ~ 38310864 (+) |
