G1444235


Basic Information

Item Value
gene id G1444235
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 36921591 ~ 36921803 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1653216
tgtttcttggcccaagcaagtctcttcttctttttggtgtccattagtagtgttttttttgcagcaaaatcgaccatgaaggcctgattcatgctgtctcctctgaacagttcatgttgttacttgaactctgtgaagcatttatttgggctgcaatcggaGGTACAGTTAACTCTagtgaacttgtcctctgcagcagaggtaactctgggt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1653216 True 213 lncRNA 0.43 1 36921591 36921803

Neighbor

gene id symbol gene type direction distance location
LOC110493846 NA coding upstream 119292 36795839 ~ 36802299 (+)
LOC110493845 LOC106565027 coding upstream 151809 36723934 ~ 36769782 (+)
if6 if6 coding upstream 244845 36670778 ~ 36676746 (+)
LOC118940420 NA coding upstream 255773 36660348 ~ 36665818 (+)
mmp24 mmp24 coding upstream 279872 36573971 ~ 36641719 (+)
rbpjl LOC106565033 coding downstream 29368 36951171 ~ 36978642 (+)
LOC110493852 spag1 coding downstream 107778 37029581 ~ 37033137 (+)
LOC118940422 NA coding downstream 189449 37111252 ~ 37112362 (+)
LOC118940423 NA coding downstream 373519 37295322 ~ 37301815 (+)
LOC118940100 NA coding downstream 381079 37302882 ~ 37307944 (+)
G1444227 NA non-coding upstream 7572 36911630 ~ 36914019 (+)
G1444209 NA non-coding upstream 43825 36877104 ~ 36877766 (+)
G1444205 NA non-coding upstream 51827 36869490 ~ 36869764 (+)
G1444200 NA non-coding upstream 57747 36863498 ~ 36863844 (+)
G1444199 NA non-coding upstream 58892 36862484 ~ 36862699 (+)
G1444239 NA non-coding downstream 3464 36925267 ~ 36925649 (+)
G1444240 NA non-coding downstream 3924 36925727 ~ 36926006 (+)
G1444245 NA non-coding downstream 10258 36932061 ~ 36932349 (+)
G1444233 LOC106565035 non-coding downstream 78226 37000029 ~ 37002478 (+)
G1444303 ywhaba non-coding downstream 121126 37042929 ~ 37053253 (+)
G1444198 LOC106565031 other upstream 60582 36857566 ~ 36861009 (+)
LOC110493174 LOC106582647 other upstream 363820 36492282 ~ 36557771 (+)
G1443844 NA other upstream 546217 36331235 ~ 36375374 (+)
LOC118940407 NA other upstream 680866 36234292 ~ 36242642 (+)
G1443251 NA other upstream 1169801 35746872 ~ 35751790 (+)
G1444933 NA other downstream 480394 37402197 ~ 37402492 (+)
chd6 NA other downstream 512972 37406926 ~ 37514061 (+)
rbl1 rbl1 other downstream 664077 37538220 ~ 37588797 (+)
G1446149 NA other downstream 1387326 38309129 ~ 38310864 (+)
pmepa1 pmepa1 other downstream 2421224 39342991 ~ 39426900 (+)

Expression


Co-expression Network