Gene
RNA
| Item | Value |
|---|---|
| gene id | G1444382 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 37189882 ~ 37210863 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1653373 | True | 613 | lncRNA | 0.54 | 2 | 37189882 | 37210863 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118940422 | NA | coding | upstream | 77520 | 37111252 ~ 37112362 (+) |
| LOC110493852 | spag1 | coding | upstream | 156745 | 37029581 ~ 37033137 (+) |
| rbpjl | LOC106565033 | coding | upstream | 211240 | 36951171 ~ 36978642 (+) |
| LOC110493846 | NA | coding | upstream | 387583 | 36795839 ~ 36802299 (+) |
| LOC110493845 | LOC106565027 | coding | upstream | 420100 | 36723934 ~ 36769782 (+) |
| LOC118940423 | NA | coding | downstream | 84459 | 37295322 ~ 37301815 (+) |
| LOC118940100 | NA | coding | downstream | 92019 | 37302882 ~ 37307944 (+) |
| LOC110493859 | LOC106565040 | coding | downstream | 98849 | 37309712 ~ 37319725 (+) |
| LOC110493860 | NA | coding | downstream | 167546 | 37378409 ~ 37392533 (+) |
| chd6 | NA | coding | downstream | 196063 | 37406926 ~ 37514061 (+) |
| G1444331 | NA | non-coding | upstream | 1393 | 37168836 ~ 37188489 (+) |
| G1444367 | LOC106565038 | non-coding | upstream | 61392 | 37127664 ~ 37128490 (+) |
| G1444357 | NA | non-coding | upstream | 74007 | 37115675 ~ 37115875 (+) |
| G1444356 | NA | non-coding | upstream | 74234 | 37115449 ~ 37115648 (+) |
| G1444303 | ywhaba | non-coding | upstream | 136629 | 37042929 ~ 37053253 (+) |
| G1444820 | NA | non-coding | downstream | 37299 | 37248162 ~ 37248878 (+) |
| G1444823 | NA | non-coding | downstream | 39129 | 37249992 ~ 37250244 (+) |
| G1444916 | NA | non-coding | downstream | 300467 | 37511330 ~ 37519969 (+) |
| G1444198 | LOC106565031 | other | upstream | 328873 | 36857566 ~ 36861009 (+) |
| LOC110493174 | LOC106582647 | other | upstream | 632111 | 36492282 ~ 36557771 (+) |
| G1443844 | NA | other | upstream | 814508 | 36331235 ~ 36375374 (+) |
| LOC118940407 | NA | other | upstream | 949157 | 36234292 ~ 36242642 (+) |
| G1443251 | NA | other | upstream | 1438092 | 35746872 ~ 35751790 (+) |
| G1444933 | NA | other | downstream | 191334 | 37402197 ~ 37402492 (+) |
| rbl1 | rbl1 | other | downstream | 375017 | 37538220 ~ 37588797 (+) |
| G1446149 | NA | other | downstream | 1098266 | 38309129 ~ 38310864 (+) |
| pmepa1 | pmepa1 | other | downstream | 2132164 | 39342991 ~ 39426900 (+) |
