G1444820


Basic Information

Item Value
gene id G1444820
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 37248162 ~ 37248878 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1653823
aagcaccacaaacgattatgttaggtcaccaccaagccacagaataaacacagccatttttccagccaaagataggagtcacaaaaagcacaaatagagataaaatgaatcactaacctttgatgatcttcatcagatgacactcataggacttcatgttacacaatacatgtatgttttgtttgataaagttcatatttatataaaaaaatctgagtttacattggcgcgttacgttcactagttccaaaaacatccagtgattttgcatagccacatcgattcaacagaaatactcatcataaatgtagatgataatacaagttatacacatggaattatagatataactctccttaatgcaaccgctgtgtcagatttcaaaaaaactttacggaaaaagcaaatcatgcaataatctgagacggagctcagaaaaataatcaaattatccgccatgttggagtcaacagaaaccagaaattacatgataaatattcccttacctctgatgatcttcatcagaacgcactcccaggaatcccaggtccacaataaacgCTTGATTTGTTCGacaatgtccgttatttatgtccaagtagctacttttgttagcgcgttaggTATACATATTCAAACGCTCGTACATTACTTCGGagaaaaacttcaaaaagttatattacaggtcgaagaaacacttcaaactaagtatagaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1653823 True 717 lncRNA 0.35 1 37248162 37248878

Neighbor

gene id symbol gene type direction distance location
LOC118940422 NA coding upstream 135800 37111252 ~ 37112362 (+)
LOC110493852 spag1 coding upstream 215025 37029581 ~ 37033137 (+)
rbpjl LOC106565033 coding upstream 269520 36951171 ~ 36978642 (+)
LOC110493846 NA coding upstream 445863 36795839 ~ 36802299 (+)
LOC110493845 LOC106565027 coding upstream 478380 36723934 ~ 36769782 (+)
LOC118940423 NA coding downstream 46444 37295322 ~ 37301815 (+)
LOC118940100 NA coding downstream 54004 37302882 ~ 37307944 (+)
LOC110493859 LOC106565040 coding downstream 60834 37309712 ~ 37319725 (+)
LOC110493860 NA coding downstream 129531 37378409 ~ 37392533 (+)
chd6 NA coding downstream 158048 37406926 ~ 37514061 (+)
G1444382 NA non-coding upstream 37299 37189882 ~ 37210863 (+)
G1444331 NA non-coding upstream 59673 37168836 ~ 37188489 (+)
G1444367 LOC106565038 non-coding upstream 119672 37127664 ~ 37128490 (+)
G1444357 NA non-coding upstream 132287 37115675 ~ 37115875 (+)
G1444356 NA non-coding upstream 132514 37115449 ~ 37115648 (+)
G1444823 NA non-coding downstream 1114 37249992 ~ 37250244 (+)
G1444916 NA non-coding downstream 262452 37511330 ~ 37519969 (+)
G1444980 NA non-coding downstream 281603 37530481 ~ 37530685 (+)
G1444198 LOC106565031 other upstream 387153 36857566 ~ 36861009 (+)
LOC110493174 LOC106582647 other upstream 690391 36492282 ~ 36557771 (+)
G1443844 NA other upstream 872788 36331235 ~ 36375374 (+)
LOC118940407 NA other upstream 1007437 36234292 ~ 36242642 (+)
G1443251 NA other upstream 1496372 35746872 ~ 35751790 (+)
G1444933 NA other downstream 153319 37402197 ~ 37402492 (+)
rbl1 rbl1 other downstream 337002 37538220 ~ 37588797 (+)
G1446149 NA other downstream 1060251 38309129 ~ 38310864 (+)
pmepa1 pmepa1 other downstream 2094149 39342991 ~ 39426900 (+)

Expression


Co-expression Network