G1444983


Basic Information

Item Value
gene id G1444983
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 37537093 ~ 37537332 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1654005
GATACACtgtatattgtataaaaatacttctttgtttttagaatattggttccgaaataatatcctattggtgagccaactggtaaatgcagagggtcttttactcagttataaggaaatcttatcactttacaaggtccctgtaacgtCTAAAGATTTTGCAactgttttagatgccattccctcaggtgttgctgtATTATTCAGGAatgtgtcaagacctgaccctcagagcctacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1654005 True 240 lncRNA 0.37 1 37537093 37537332

Neighbor

gene id symbol gene type direction distance location
chd6 NA coding upstream 23032 37406926 ~ 37514061 (+)
LOC110493860 NA coding upstream 144560 37378409 ~ 37392533 (+)
LOC110493859 LOC106565040 coding upstream 219390 37309712 ~ 37319725 (+)
LOC118940100 NA coding upstream 229149 37302882 ~ 37307944 (+)
LOC118940423 NA coding upstream 235278 37295322 ~ 37301815 (+)
rbl1 rbl1 coding downstream 888 37538220 ~ 37588797 (+)
LOC110493179 pigu coding downstream 808276 38345608 ~ 38365362 (+)
osgn1 LOC106565048 coding downstream 852801 38390133 ~ 38405953 (+)
mtss1 LOC106565049 coding downstream 890841 38428173 ~ 38546783 (+)
romo1 romo1 coding downstream 1138732 38675958 ~ 38677481 (+)
G1444980 NA non-coding upstream 6408 37530481 ~ 37530685 (+)
G1444916 NA non-coding upstream 17124 37511330 ~ 37519969 (+)
G1444823 NA non-coding upstream 286849 37249992 ~ 37250244 (+)
G1445015 NA non-coding downstream 55459 37592791 ~ 37593001 (+)
G1445017 LOC106609167 non-coding downstream 58989 37596321 ~ 37596616 (+)
G1445018 NA non-coding downstream 59359 37596691 ~ 37596985 (+)
G1445027 NA non-coding downstream 66910 37604242 ~ 37604524 (+)
G1445031 NA non-coding downstream 71910 37609242 ~ 37609456 (+)
G1444933 NA other upstream 134601 37402197 ~ 37402492 (+)
G1444198 LOC106565031 other upstream 676084 36857566 ~ 36861009 (+)
LOC110493174 LOC106582647 other upstream 979322 36492282 ~ 36557771 (+)
G1443844 NA other upstream 1161719 36331235 ~ 36375374 (+)
G1446149 NA other downstream 771797 38309129 ~ 38310864 (+)
pmepa1 pmepa1 other downstream 1805695 39342991 ~ 39426900 (+)
G1447998 NA other downstream 2262604 39799936 ~ 39800236 (+)
LOC110493893 cdh22 other downstream 3412210 40767465 ~ 41084819 (+)

Expression


Co-expression Network