G1445031


Basic Information

Item Value
gene id G1445031
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 37609242 ~ 37609456 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1654056
CCCAAGAAAcgcccacatcaaaccacacccccaagacaACTCACATTTGGCTTCTGTCATGGCCACCAGAATTTCTTGAGGAGCAAGCCAAAAAATAAGGCCAAATCAGCGGGTGCAGTTCCCCTTTAAAGTAACTACCTAGTAAAAATCGTacttttaaaagttcatattTGATTCTACTCGTATCCAAATAACTTTGTTGACTCGTCCTATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1654056 True 215 lncRNA 0.41 1 37609242 37609456

Neighbor

gene id symbol gene type direction distance location
rbl1 rbl1 coding upstream 20445 37538220 ~ 37588797 (+)
chd6 NA coding upstream 95181 37406926 ~ 37514061 (+)
LOC110493860 NA coding upstream 216709 37378409 ~ 37392533 (+)
LOC110493859 LOC106565040 coding upstream 291539 37309712 ~ 37319725 (+)
LOC118940100 NA coding upstream 301298 37302882 ~ 37307944 (+)
LOC110493179 pigu coding downstream 736152 38345608 ~ 38365362 (+)
osgn1 LOC106565048 coding downstream 780677 38390133 ~ 38405953 (+)
mtss1 LOC106565049 coding downstream 818717 38428173 ~ 38546783 (+)
romo1 romo1 coding downstream 1066608 38675958 ~ 38677481 (+)
raly LOC106565059 coding downstream 1299933 38909389 ~ 39081461 (+)
G1445027 NA non-coding upstream 4718 37604242 ~ 37604524 (+)
G1445018 NA non-coding upstream 12257 37596691 ~ 37596985 (+)
G1445017 LOC106609167 non-coding upstream 12626 37596321 ~ 37596616 (+)
G1445015 NA non-coding upstream 16241 37592791 ~ 37593001 (+)
G1444983 NA non-coding upstream 71910 37537093 ~ 37537332 (+)
G1445264 NA non-coding downstream 23417 37632873 ~ 37633072 (+)
G1445265 NA non-coding downstream 23834 37633290 ~ 37633618 (+)
G1445275 NA non-coding downstream 31875 37641331 ~ 37641534 (+)
G1445282 NA non-coding downstream 35051 37644507 ~ 37645416 (+)
G1445295 NA non-coding downstream 45204 37654660 ~ 37654878 (+)
G1444933 NA other upstream 206750 37402197 ~ 37402492 (+)
G1444198 LOC106565031 other upstream 748233 36857566 ~ 36861009 (+)
LOC110493174 LOC106582647 other upstream 1051471 36492282 ~ 36557771 (+)
G1446149 NA other downstream 699673 38309129 ~ 38310864 (+)
pmepa1 pmepa1 other downstream 1733571 39342991 ~ 39426900 (+)
G1447998 NA other downstream 2190480 39799936 ~ 39800236 (+)
LOC110493893 cdh22 other downstream 3340086 40767465 ~ 41084819 (+)
LOC110493897 LOC106565282 other downstream 4032667 41641874 ~ 41706180 (+)

Expression


Co-expression Network