G1445282


Basic Information

Item Value
gene id G1445282
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 37644507 ~ 37645416 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1654327
GTCTGATCATGTGATGAGTTCGCGAATCAAAATTCCCACTTGTGCTGCCACTGGACAGCAAAAAAACAAGTTGGAACCAACATGCAGTACATCCAGCAGGAAGAGAGGCAAGAACCATTGGTCTGCCAGTTCAGGGACAAGCTAAACTATTCACAGCCTTTTGTAATTTTCAGTGTAATTGCATTGCTGGACTTTTTGAAACTatgtatttgtattgttttataAATGTACAGATTAAAGGAAATGTGTGGATTAAA

Function

NR:

description
uncharacterized protein LOC110498535

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1654327 True 257 lncRNA 0.39 2 37644507 37645416

Neighbor

gene id symbol gene type direction distance location
rbl1 rbl1 coding upstream 55710 37538220 ~ 37588797 (+)
chd6 NA coding upstream 130446 37406926 ~ 37514061 (+)
LOC110493860 NA coding upstream 251974 37378409 ~ 37392533 (+)
LOC110493859 LOC106565040 coding upstream 326804 37309712 ~ 37319725 (+)
LOC118940100 NA coding upstream 336563 37302882 ~ 37307944 (+)
LOC110493179 pigu coding downstream 700192 38345608 ~ 38365362 (+)
osgn1 LOC106565048 coding downstream 744717 38390133 ~ 38405953 (+)
mtss1 LOC106565049 coding downstream 782757 38428173 ~ 38546783 (+)
romo1 romo1 coding downstream 1030648 38675958 ~ 38677481 (+)
raly LOC106565059 coding downstream 1263973 38909389 ~ 39081461 (+)
G1445275 NA non-coding upstream 2973 37641331 ~ 37641534 (+)
G1445265 NA non-coding upstream 10889 37633290 ~ 37633618 (+)
G1445264 NA non-coding upstream 11435 37632873 ~ 37633072 (+)
G1445031 NA non-coding upstream 35051 37609242 ~ 37609456 (+)
G1445027 NA non-coding upstream 39983 37604242 ~ 37604524 (+)
G1445295 NA non-coding downstream 9244 37654660 ~ 37654878 (+)
G1445324 NA non-coding downstream 50923 37696339 ~ 37697937 (+)
G1445373 NA non-coding downstream 115159 37760575 ~ 37773881 (+)
G1446145 NA non-coding downstream 660661 38306077 ~ 38306465 (+)
G1446151 NA non-coding downstream 665713 38311129 ~ 38311384 (+)
G1444933 NA other upstream 242015 37402197 ~ 37402492 (+)
G1444198 LOC106565031 other upstream 783498 36857566 ~ 36861009 (+)
LOC110493174 LOC106582647 other upstream 1086736 36492282 ~ 36557771 (+)
G1446149 NA other downstream 663713 38309129 ~ 38310864 (+)
pmepa1 pmepa1 other downstream 1697611 39342991 ~ 39426900 (+)
G1447998 NA other downstream 2154520 39799936 ~ 39800236 (+)
LOC110493893 cdh22 other downstream 3304126 40767465 ~ 41084819 (+)
LOC110493897 LOC106565282 other downstream 3996707 41641874 ~ 41706180 (+)

Expression


Co-expression Network