G1445295


Basic Information

Item Value
gene id G1445295
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 37654660 ~ 37654878 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1654341
ggcctattaattagggccgatttcaagttttcataatcggaAATCGGGATATTTTTGGGCTCCGATTTgccgatttaaaaaatgtttttttacacctttatttaactaggcaagtcagttaggaacacattcttattttcaatgacggcctaggaacggtgggttaactgcctcattcaggggcagaaagacagattttcaccttgtcagctcggggat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1654341 True 219 lncRNA 0.41 1 37654660 37654878

Neighbor

gene id symbol gene type direction distance location
rbl1 rbl1 coding upstream 65863 37538220 ~ 37588797 (+)
chd6 NA coding upstream 140599 37406926 ~ 37514061 (+)
LOC110493860 NA coding upstream 262127 37378409 ~ 37392533 (+)
LOC110493859 LOC106565040 coding upstream 336957 37309712 ~ 37319725 (+)
LOC118940100 NA coding upstream 346716 37302882 ~ 37307944 (+)
LOC110493179 pigu coding downstream 690730 38345608 ~ 38365362 (+)
osgn1 LOC106565048 coding downstream 735255 38390133 ~ 38405953 (+)
mtss1 LOC106565049 coding downstream 773295 38428173 ~ 38546783 (+)
romo1 romo1 coding downstream 1021186 38675958 ~ 38677481 (+)
raly LOC106565059 coding downstream 1254511 38909389 ~ 39081461 (+)
G1445282 NA non-coding upstream 9244 37644507 ~ 37645416 (+)
G1445275 NA non-coding upstream 13126 37641331 ~ 37641534 (+)
G1445265 NA non-coding upstream 21042 37633290 ~ 37633618 (+)
G1445264 NA non-coding upstream 21588 37632873 ~ 37633072 (+)
G1445031 NA non-coding upstream 45204 37609242 ~ 37609456 (+)
G1445324 NA non-coding downstream 41461 37696339 ~ 37697937 (+)
G1445373 NA non-coding downstream 105697 37760575 ~ 37773881 (+)
G1446145 NA non-coding downstream 651199 38306077 ~ 38306465 (+)
G1446151 NA non-coding downstream 656251 38311129 ~ 38311384 (+)
G1446170 NA non-coding downstream 680015 38334893 ~ 38335297 (+)
G1444933 NA other upstream 252168 37402197 ~ 37402492 (+)
G1444198 LOC106565031 other upstream 793651 36857566 ~ 36861009 (+)
LOC110493174 LOC106582647 other upstream 1096889 36492282 ~ 36557771 (+)
G1446149 NA other downstream 654251 38309129 ~ 38310864 (+)
pmepa1 pmepa1 other downstream 1688149 39342991 ~ 39426900 (+)
G1447998 NA other downstream 2145058 39799936 ~ 39800236 (+)
LOC110493893 cdh22 other downstream 3294664 40767465 ~ 41084819 (+)
LOC110493897 LOC106565282 other downstream 3987245 41641874 ~ 41706180 (+)

Expression


Co-expression Network