G1445373


Basic Information

Item Value
gene id G1445373
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 37760575 ~ 37773881 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1654429
TGCTCTATCGGGAACTAGAGTGAGGCATCCAGATATGAGGTTAGCTGGCTAGCATCACCAGCATGTTAGATATGAAAGTATCTATCCAGCAACAATGTCGAGGTCAAAAACGAAAGAAACTGTTAAGCCATGCTGACTTCTTAATATAAGTCAAATCGGACTGAAATAATTCACAGGCTGAACGTACATTTCTATGACTAACTACCTAACTTTAGCTTACCAGCTCAGCCAtgtactct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1654429 True 239 lncRNA 0.41 2 37760575 37773881

Neighbor

gene id symbol gene type direction distance location
rbl1 rbl1 coding upstream 171778 37538220 ~ 37588797 (+)
chd6 NA coding upstream 246514 37406926 ~ 37514061 (+)
LOC110493860 NA coding upstream 368042 37378409 ~ 37392533 (+)
LOC110493859 LOC106565040 coding upstream 442872 37309712 ~ 37319725 (+)
LOC118940100 NA coding upstream 452631 37302882 ~ 37307944 (+)
LOC110493179 pigu coding downstream 571727 38345608 ~ 38365362 (+)
osgn1 LOC106565048 coding downstream 616252 38390133 ~ 38405953 (+)
mtss1 LOC106565049 coding downstream 654292 38428173 ~ 38546783 (+)
romo1 romo1 coding downstream 902183 38675958 ~ 38677481 (+)
raly LOC106565059 coding downstream 1135508 38909389 ~ 39081461 (+)
G1445324 NA non-coding upstream 62638 37696339 ~ 37697937 (+)
G1445295 NA non-coding upstream 105697 37654660 ~ 37654878 (+)
G1445282 NA non-coding upstream 115159 37644507 ~ 37645416 (+)
G1445275 NA non-coding upstream 119041 37641331 ~ 37641534 (+)
G1445265 NA non-coding upstream 126957 37633290 ~ 37633618 (+)
G1446145 NA non-coding downstream 532196 38306077 ~ 38306465 (+)
G1446151 NA non-coding downstream 537248 38311129 ~ 38311384 (+)
G1446170 NA non-coding downstream 561012 38334893 ~ 38335297 (+)
G1446176 NA non-coding downstream 569951 38343832 ~ 38344421 (+)
G1446189 NA non-coding downstream 583194 38357075 ~ 38357373 (+)
G1444933 NA other upstream 358083 37402197 ~ 37402492 (+)
G1444198 LOC106565031 other upstream 899566 36857566 ~ 36861009 (+)
LOC110493174 LOC106582647 other upstream 1202804 36492282 ~ 36557771 (+)
G1446149 NA other downstream 535248 38309129 ~ 38310864 (+)
pmepa1 pmepa1 other downstream 1569146 39342991 ~ 39426900 (+)
G1447998 NA other downstream 2026055 39799936 ~ 39800236 (+)
LOC110493893 cdh22 other downstream 3175661 40767465 ~ 41084819 (+)
LOC110493897 LOC106565282 other downstream 3868242 41641874 ~ 41706180 (+)

Expression


Co-expression Network