G1446189


Basic Information

Item Value
gene id G1446189
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 38357075 ~ 38357373 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1655320
gcataaatgtattttgatcccccacaccaaacgcgatcacgacacgcaggttaaaatatcaaaacaaactgtgaccaattatattaatttggagacaagtcgaaaagcattaaacatttatggcaatttagctagctagcttgctacctaatttgtcctgggatataaacattgagttgttattttacctgaaatacacaaggtcctctactccgccaattaatctacacataaaacggtcaaccaaatGGTTTCTAGTCATATCTCCtcccaggctttttcttctcttgactttacat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1655320 True 299 lncRNA 0.37 1 38357075 38357373

Neighbor

gene id symbol gene type direction distance location
rbl1 rbl1 coding upstream 768278 37538220 ~ 37588797 (+)
chd6 NA coding upstream 843014 37406926 ~ 37514061 (+)
LOC110493860 NA coding upstream 964542 37378409 ~ 37392533 (+)
LOC110493859 LOC106565040 coding upstream 1039372 37309712 ~ 37319725 (+)
LOC118940100 NA coding upstream 1049131 37302882 ~ 37307944 (+)
osgn1 LOC106565048 coding downstream 32760 38390133 ~ 38405953 (+)
mtss1 LOC106565049 coding downstream 70800 38428173 ~ 38546783 (+)
romo1 romo1 coding downstream 318691 38675958 ~ 38677481 (+)
raly LOC106565059 coding downstream 552016 38909389 ~ 39081461 (+)
asip1 asip coding downstream 821344 39178717 ~ 39183960 (+)
G1446176 NA non-coding upstream 12654 38343832 ~ 38344421 (+)
G1446170 NA non-coding upstream 21778 38334893 ~ 38335297 (+)
G1446151 NA non-coding upstream 45691 38311129 ~ 38311384 (+)
G1446145 NA non-coding upstream 50610 38306077 ~ 38306465 (+)
G1445373 NA non-coding upstream 583194 37760575 ~ 37773881 (+)
G1446204 NA non-coding downstream 3295 38360668 ~ 38360919 (+)
G1446219 NA non-coding downstream 25647 38383020 ~ 38383227 (+)
G1446250 NA non-coding downstream 169960 38527333 ~ 38586197 (+)
G1446294 NA non-coding downstream 272913 38630286 ~ 38630601 (+)
G1446302 NA non-coding downstream 291091 38648464 ~ 38649036 (+)
G1446149 NA other upstream 46211 38309129 ~ 38310864 (+)
G1444933 NA other upstream 954583 37402197 ~ 37402492 (+)
G1444198 LOC106565031 other upstream 1496066 36857566 ~ 36861009 (+)
pmepa1 pmepa1 other downstream 985654 39342991 ~ 39426900 (+)
G1447998 NA other downstream 1442563 39799936 ~ 39800236 (+)
LOC110493893 cdh22 other downstream 2592169 40767465 ~ 41084819 (+)
LOC110493897 LOC106565282 other downstream 3284750 41641874 ~ 41706180 (+)
G1450387 NA other downstream 3435510 41792883 ~ 41890515 (+)

Expression


Co-expression Network