G1446991



Basic Information


Item Value
gene id G1446991
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 39086508 ~ 39086726 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1656165
CCTTGATCCAGTATTGATGATTAATTAACGTCTAtaaatagattattttttttaaatgtatccgttattttaccaggtaagttgactgagaacacattctcatttgcagcaacgacctggggaatagttacaggggagaggagggggatgaatgagccaattgtaaacgtATGACTCCAAGGAGGAAGGAAGTTACCGCTTCCAACGACTCATGAACCC

Function


GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
TU1656165 True 219 lncRNA 0.40 1 39086508 39086726

Neighbor


gene id symbol gene type direction distance location
raly LOC106565059 coding upstream 5047 38909389 ~ 39081461 (+)
romo1 romo1 coding upstream 409027 38675958 ~ 38677481 (+)
mtss1 LOC106565049 coding upstream 539725 38428173 ~ 38546783 (+)
osgn1 LOC106565048 coding upstream 680555 38390133 ~ 38405953 (+)
LOC110493179 pigu coding upstream 721146 38345608 ~ 38365362 (+)
asip1 asip coding downstream 91991 39178717 ~ 39183960 (+)
LOC110493876 NA coding downstream 133537 39220263 ~ 39225724 (+)
pmepa1 pmepa1 coding downstream 256265 39342991 ~ 39426900 (+)
ccndbp1 ccndbp1 coding downstream 413970 39500696 ~ 39521498 (+)
LOC110493884 LOC106565072 coding downstream 565138 39651864 ~ 39696026 (+)
G1446874 NA non-coding upstream 3064 39081804 ~ 39083444 (+)
G1446956 NA non-coding upstream 39177 39026261 ~ 39047331 (+)
G1446570 NA non-coding upstream 362156 38724062 ~ 38724352 (+)
G1446547 LOC106565051 non-coding upstream 384678 38688427 ~ 38701830 (+)
G1446994 NA non-coding downstream 2543 39089269 ~ 39089478 (+)
G1446992 NA non-coding downstream 3179 39089905 ~ 39091148 (+)
G1447017 NA non-coding downstream 36041 39122767 ~ 39122968 (+)
G1447480 NA non-coding downstream 343250 39429976 ~ 39434546 (+)
G1447563 NA non-coding downstream 520243 39606969 ~ 39607548 (+)
G1446149 NA other upstream 775644 38309129 ~ 38310864 (+)
rbl1 rbl1 other upstream 1497781 37538220 ~ 37588797 (+)
chd6 NA other upstream 1646096 37406926 ~ 37514061 (+)
G1444933 NA other upstream 1684016 37402197 ~ 37402492 (+)
G1444198 LOC106565031 other upstream 2225499 36857566 ~ 36861009 (+)
G1447998 NA other downstream 713210 39799936 ~ 39800236 (+)
LOC110493893 cdh22 other downstream 1862816 40767465 ~ 41084819 (+)
LOC110493897 LOC106565282 other downstream 2555397 41641874 ~ 41706180 (+)
G1450387 NA other downstream 2706157 41792883 ~ 41890515 (+)

Expression



Co-expression Network