G1446994


Basic Information

Item Value
gene id G1446994
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 39089269 ~ 39089478 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1656168
ggaagccaattctagatttaactttggattgaagatgtttgatgtgagtctggaaggagagtttacagtctaaccagacacctatgtatttgtagttgtccacatattctaagtcagaaccgtccagagtagtgatgctggacgggcgggcaggcagcaatcgtttgaagagcatgcatttagttttacttgtatttaagagcagttgga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1656168 True 210 lncRNA 0.42 1 39089269 39089478

Neighbor

gene id symbol gene type direction distance location
raly LOC106565059 coding upstream 7808 38909389 ~ 39081461 (+)
romo1 romo1 coding upstream 411788 38675958 ~ 38677481 (+)
mtss1 LOC106565049 coding upstream 542486 38428173 ~ 38546783 (+)
osgn1 LOC106565048 coding upstream 683316 38390133 ~ 38405953 (+)
LOC110493179 pigu coding upstream 723907 38345608 ~ 38365362 (+)
asip1 asip coding downstream 89239 39178717 ~ 39183960 (+)
LOC110493876 NA coding downstream 130785 39220263 ~ 39225724 (+)
pmepa1 pmepa1 coding downstream 253513 39342991 ~ 39426900 (+)
ccndbp1 ccndbp1 coding downstream 411218 39500696 ~ 39521498 (+)
LOC110493884 LOC106565072 coding downstream 562386 39651864 ~ 39696026 (+)
G1446991 NA non-coding upstream 2543 39086508 ~ 39086726 (+)
G1446874 NA non-coding upstream 5825 39081804 ~ 39083444 (+)
G1446956 NA non-coding upstream 41938 39026261 ~ 39047331 (+)
G1446570 NA non-coding upstream 364917 38724062 ~ 38724352 (+)
G1446992 NA non-coding downstream 427 39089905 ~ 39091148 (+)
G1447017 NA non-coding downstream 33289 39122767 ~ 39122968 (+)
G1447480 NA non-coding downstream 340498 39429976 ~ 39434546 (+)
G1447563 NA non-coding downstream 517491 39606969 ~ 39607548 (+)
G1447558 NA non-coding downstream 607740 39697218 ~ 39717880 (+)
G1446149 NA other upstream 778405 38309129 ~ 38310864 (+)
rbl1 rbl1 other upstream 1500542 37538220 ~ 37588797 (+)
chd6 NA other upstream 1648857 37406926 ~ 37514061 (+)
G1444933 NA other upstream 1686777 37402197 ~ 37402492 (+)
G1444198 LOC106565031 other upstream 2228260 36857566 ~ 36861009 (+)
G1447998 NA other downstream 710458 39799936 ~ 39800236 (+)
LOC110493893 cdh22 other downstream 1860064 40767465 ~ 41084819 (+)
LOC110493897 LOC106565282 other downstream 2552645 41641874 ~ 41706180 (+)
G1450387 NA other downstream 2703405 41792883 ~ 41890515 (+)

Expression


Co-expression Network