Gene
RNA
| Item | Value |
|---|---|
| gene id | G1447480 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 39429976 ~ 39434546 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1656671 | True | 648 | lncRNA | 0.42 | 2 | 39429976 | 39434546 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pmepa1 | pmepa1 | coding | upstream | 10165 | 39342991 ~ 39426900 (+) |
| LOC110493876 | NA | coding | upstream | 204252 | 39220263 ~ 39225724 (+) |
| asip1 | asip | coding | upstream | 246016 | 39178717 ~ 39183960 (+) |
| raly | LOC106565059 | coding | upstream | 348515 | 38909389 ~ 39081461 (+) |
| romo1 | romo1 | coding | upstream | 752495 | 38675958 ~ 38677481 (+) |
| ccndbp1 | ccndbp1 | coding | downstream | 66150 | 39500696 ~ 39521498 (+) |
| LOC110493884 | LOC106565072 | coding | downstream | 217318 | 39651864 ~ 39696026 (+) |
| LOC110493887 | LOC106565076 | coding | downstream | 471727 | 39906273 ~ 39917797 (+) |
| LOC110493888 | LOC106565077 | coding | downstream | 514080 | 39948626 ~ 40269835 (+) |
| LOC110493889 | LOC106565080 | coding | downstream | 878330 | 40312876 ~ 40367740 (+) |
| G1447017 | NA | non-coding | upstream | 307008 | 39122767 ~ 39122968 (+) |
| G1446992 | NA | non-coding | upstream | 338828 | 39089905 ~ 39091148 (+) |
| G1446994 | NA | non-coding | upstream | 340498 | 39089269 ~ 39089478 (+) |
| G1446991 | NA | non-coding | upstream | 343250 | 39086508 ~ 39086726 (+) |
| G1446874 | NA | non-coding | upstream | 346532 | 39081804 ~ 39083444 (+) |
| G1447563 | NA | non-coding | downstream | 172423 | 39606969 ~ 39607548 (+) |
| G1447558 | NA | non-coding | downstream | 262672 | 39697218 ~ 39717880 (+) |
| G1447648 | NA | non-coding | downstream | 286251 | 39720797 ~ 39767245 (+) |
| G1448007 | NA | non-coding | downstream | 371398 | 39805944 ~ 39806156 (+) |
| G1448130 | NA | non-coding | downstream | 469714 | 39904260 ~ 39904461 (+) |
| G1446149 | NA | other | upstream | 1119112 | 38309129 ~ 38310864 (+) |
| rbl1 | rbl1 | other | upstream | 1841249 | 37538220 ~ 37588797 (+) |
| chd6 | NA | other | upstream | 1989564 | 37406926 ~ 37514061 (+) |
| G1444933 | NA | other | upstream | 2027484 | 37402197 ~ 37402492 (+) |
| G1447998 | NA | other | downstream | 365390 | 39799936 ~ 39800236 (+) |
| LOC110493893 | cdh22 | other | downstream | 1514996 | 40767465 ~ 41084819 (+) |
| LOC110493897 | LOC106565282 | other | downstream | 2207577 | 41641874 ~ 41706180 (+) |
| G1450387 | NA | other | downstream | 2358337 | 41792883 ~ 41890515 (+) |
| G1451948 | LOC570405 | other | downstream | 3894040 | 43328586 ~ 43459832 (+) |
