Gene
RNA
| Item | Value |
|---|---|
| gene id | G1448007 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 39805944 ~ 39806156 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1657239 | True | 213 | lncRNA | 0.46 | 1 | 39805944 | 39806156 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493884 | LOC106565072 | coding | upstream | 109918 | 39651864 ~ 39696026 (+) |
| ccndbp1 | ccndbp1 | coding | upstream | 284446 | 39500696 ~ 39521498 (+) |
| pmepa1 | pmepa1 | coding | upstream | 386133 | 39342991 ~ 39426900 (+) |
| LOC110493876 | NA | coding | upstream | 580220 | 39220263 ~ 39225724 (+) |
| asip1 | asip | coding | upstream | 621984 | 39178717 ~ 39183960 (+) |
| LOC110493887 | LOC106565076 | coding | downstream | 100117 | 39906273 ~ 39917797 (+) |
| LOC110493888 | LOC106565077 | coding | downstream | 142470 | 39948626 ~ 40269835 (+) |
| LOC110493889 | LOC106565080 | coding | downstream | 506720 | 40312876 ~ 40367740 (+) |
| LOC118940425 | dnttip1 | coding | downstream | 561601 | 40367757 ~ 40378949 (+) |
| LOC118940426 | LOC106565291 | coding | downstream | 577029 | 40383185 ~ 40385420 (+) |
| G1447648 | NA | non-coding | upstream | 38699 | 39720797 ~ 39767245 (+) |
| G1447558 | NA | non-coding | upstream | 88064 | 39697218 ~ 39717880 (+) |
| G1447563 | NA | non-coding | upstream | 198396 | 39606969 ~ 39607548 (+) |
| G1447480 | NA | non-coding | upstream | 371398 | 39429976 ~ 39434546 (+) |
| G1447017 | NA | non-coding | upstream | 682976 | 39122767 ~ 39122968 (+) |
| G1448130 | NA | non-coding | downstream | 98104 | 39904260 ~ 39904461 (+) |
| G1448150 | NA | non-coding | downstream | 134769 | 39940925 ~ 39941301 (+) |
| G1448174 | NA | non-coding | downstream | 181378 | 39987534 ~ 39988009 (+) |
| G1448318 | NA | non-coding | downstream | 467704 | 40273860 ~ 40274685 (+) |
| G1448324 | NA | non-coding | downstream | 470152 | 40276308 ~ 40276575 (+) |
| G1447998 | NA | other | upstream | 5708 | 39799936 ~ 39800236 (+) |
| G1446149 | NA | other | upstream | 1495080 | 38309129 ~ 38310864 (+) |
| rbl1 | rbl1 | other | upstream | 2217217 | 37538220 ~ 37588797 (+) |
| chd6 | NA | other | upstream | 2365532 | 37406926 ~ 37514061 (+) |
| LOC110493893 | cdh22 | other | downstream | 1143386 | 40767465 ~ 41084819 (+) |
| LOC110493897 | LOC106565282 | other | downstream | 1835967 | 41641874 ~ 41706180 (+) |
| G1450387 | NA | other | downstream | 1986727 | 41792883 ~ 41890515 (+) |
| G1451948 | LOC570405 | other | downstream | 3522430 | 43328586 ~ 43459832 (+) |
| G1451956 | LOC106958509 | other | downstream | 3522943 | 43329099 ~ 43409816 (+) |
