G1448130


Basic Information

Item Value
gene id G1448130
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 39904260 ~ 39904461 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1657376
ggggagagtgcacaacaacaaaaaataactgGTTTGTTACATTCACCTccgaaggtaaataatgtacttacattcagtaatcttgctctgatttgtcatcatgagggtcccagagataaaatgtagcatagttttgtttgatcaaatccatttttatattcaaatgtaggaactgggttctacagtttgaaccgttgctgtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1657376 True 202 lncRNA 0.37 1 39904260 39904461

Neighbor

gene id symbol gene type direction distance location
LOC110493884 LOC106565072 coding upstream 208234 39651864 ~ 39696026 (+)
ccndbp1 ccndbp1 coding upstream 382762 39500696 ~ 39521498 (+)
pmepa1 pmepa1 coding upstream 484449 39342991 ~ 39426900 (+)
LOC110493876 NA coding upstream 678536 39220263 ~ 39225724 (+)
asip1 asip coding upstream 720300 39178717 ~ 39183960 (+)
LOC110493887 LOC106565076 coding downstream 1812 39906273 ~ 39917797 (+)
LOC110493888 LOC106565077 coding downstream 44165 39948626 ~ 40269835 (+)
LOC110493889 LOC106565080 coding downstream 408415 40312876 ~ 40367740 (+)
LOC118940425 dnttip1 coding downstream 463296 40367757 ~ 40378949 (+)
LOC118940426 LOC106565291 coding downstream 478724 40383185 ~ 40385420 (+)
G1448007 NA non-coding upstream 98104 39805944 ~ 39806156 (+)
G1447648 NA non-coding upstream 137015 39720797 ~ 39767245 (+)
G1447558 NA non-coding upstream 186380 39697218 ~ 39717880 (+)
G1447563 NA non-coding upstream 296712 39606969 ~ 39607548 (+)
G1447480 NA non-coding upstream 469714 39429976 ~ 39434546 (+)
G1448150 NA non-coding downstream 36464 39940925 ~ 39941301 (+)
G1448174 NA non-coding downstream 83073 39987534 ~ 39988009 (+)
G1448318 NA non-coding downstream 369399 40273860 ~ 40274685 (+)
G1448324 NA non-coding downstream 371847 40276308 ~ 40276575 (+)
G1448325 NA non-coding downstream 372326 40276787 ~ 40277138 (+)
G1447998 NA other upstream 104024 39799936 ~ 39800236 (+)
G1446149 NA other upstream 1593396 38309129 ~ 38310864 (+)
rbl1 rbl1 other upstream 2315533 37538220 ~ 37588797 (+)
chd6 NA other upstream 2463848 37406926 ~ 37514061 (+)
LOC110493893 cdh22 other downstream 1045081 40767465 ~ 41084819 (+)
LOC110493897 LOC106565282 other downstream 1737662 41641874 ~ 41706180 (+)
G1450387 NA other downstream 1888422 41792883 ~ 41890515 (+)
G1451948 LOC570405 other downstream 3424125 43328586 ~ 43459832 (+)
G1451956 LOC106958509 other downstream 3424638 43329099 ~ 43409816 (+)

Expression


Co-expression Network