G1448150


Basic Information

Item Value
gene id G1448150
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 39940925 ~ 39941301 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1657396
acacccctgaggggccccagtattgaggatcagcgtggcgtatttgttgttacctacccatgccatcctggggcggcccgtcaggaagtccatgatccagtttgagagggaggtgtttagtcccatggtctgtagcttattgatgagctttgtggacactatggtgttgaacgctgagctgtagtcaatgaacagcattctcacataggtgttccttttgtccaggtgggaaagggcagtgtggagtgcgattgagattgcatcatctgtggatctgctggggcggtatgcgaattggagtgggtctatggtatccgggaggatgctgttgatgtgagccatgaccagcctttcaaagcacccCATGGCTgtagacg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1657396 True 377 lncRNA 0.53 1 39940925 39941301

Neighbor

gene id symbol gene type direction distance location
LOC110493887 LOC106565076 coding upstream 23128 39906273 ~ 39917797 (+)
LOC110493884 LOC106565072 coding upstream 244899 39651864 ~ 39696026 (+)
ccndbp1 ccndbp1 coding upstream 419427 39500696 ~ 39521498 (+)
pmepa1 pmepa1 coding upstream 521114 39342991 ~ 39426900 (+)
LOC110493876 NA coding upstream 715201 39220263 ~ 39225724 (+)
LOC110493888 LOC106565077 coding downstream 7325 39948626 ~ 40269835 (+)
LOC110493889 LOC106565080 coding downstream 371575 40312876 ~ 40367740 (+)
LOC118940425 dnttip1 coding downstream 426456 40367757 ~ 40378949 (+)
LOC118940426 LOC106565291 coding downstream 441884 40383185 ~ 40385420 (+)
LOC110493184 LOC106565288 coding downstream 507226 40448527 ~ 40474689 (+)
G1448130 NA non-coding upstream 36464 39904260 ~ 39904461 (+)
G1448007 NA non-coding upstream 134769 39805944 ~ 39806156 (+)
G1447648 NA non-coding upstream 173680 39720797 ~ 39767245 (+)
G1447558 NA non-coding upstream 223045 39697218 ~ 39717880 (+)
G1447563 NA non-coding upstream 333377 39606969 ~ 39607548 (+)
G1448174 NA non-coding downstream 46233 39987534 ~ 39988009 (+)
G1448318 NA non-coding downstream 332559 40273860 ~ 40274685 (+)
G1448324 NA non-coding downstream 335007 40276308 ~ 40276575 (+)
G1448325 NA non-coding downstream 335486 40276787 ~ 40277138 (+)
G1448327 NA non-coding downstream 336864 40278165 ~ 40278684 (+)
G1447998 NA other upstream 140689 39799936 ~ 39800236 (+)
G1446149 NA other upstream 1630061 38309129 ~ 38310864 (+)
rbl1 rbl1 other upstream 2352198 37538220 ~ 37588797 (+)
chd6 NA other upstream 2500513 37406926 ~ 37514061 (+)
LOC110493893 cdh22 other downstream 1008241 40767465 ~ 41084819 (+)
LOC110493897 LOC106565282 other downstream 1700822 41641874 ~ 41706180 (+)
G1450387 NA other downstream 1851582 41792883 ~ 41890515 (+)
G1451948 LOC570405 other downstream 3387285 43328586 ~ 43459832 (+)
G1451956 LOC106958509 other downstream 3387798 43329099 ~ 43409816 (+)

Expression


Co-expression Network