G1448174



Basic Information


Item Value
gene id G1448174
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 39987534 ~ 39988009 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1657421
aaacaaaatagacttttactcaagtagtatattactgggtgacttttacttgagtcattttctattaacgtatctttacttttactcgagTATGACAATATGgtgctttttccaccactgcaattgagtgcaggaaatgcagaaattataaaagtgctgaaatatgttttgattgaagttgaattgaatagtataaaacaatcagaatggagaaagatttattgaaatcacttagagtgtatgtgttgccaccctaggatcactcactactcatacagCAAATGTAAaacttttaTTAAATATCGTCATGCCATCCatttttaaacaattttaaatACAGTGATATATTATTTTGGcgatatcgcccagccctaacgCAGCGTGtgagtttggggaagatcattttcaccataaaaatgcaactttataataaaaacattacatgcataatca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1657421 True 453 lncRNA 0.32 2 39987534 39988009

Neighbor


gene id symbol gene type direction distance location
LOC110493887 LOC106565076 coding upstream 69737 39906273 ~ 39917797 (+)
LOC110493884 LOC106565072 coding upstream 291508 39651864 ~ 39696026 (+)
ccndbp1 ccndbp1 coding upstream 466036 39500696 ~ 39521498 (+)
pmepa1 pmepa1 coding upstream 567723 39342991 ~ 39426900 (+)
LOC110493876 NA coding upstream 761810 39220263 ~ 39225724 (+)
LOC110493889 LOC106565080 coding downstream 324867 40312876 ~ 40367740 (+)
LOC118940425 dnttip1 coding downstream 379748 40367757 ~ 40378949 (+)
LOC118940426 LOC106565291 coding downstream 395176 40383185 ~ 40385420 (+)
LOC110493184 LOC106565288 coding downstream 460518 40448527 ~ 40474689 (+)
LOC110493893 cdh22 coding downstream 779456 40767465 ~ 41084819 (+)
G1448150 NA non-coding upstream 46233 39940925 ~ 39941301 (+)
G1448130 NA non-coding upstream 83073 39904260 ~ 39904461 (+)
G1448007 NA non-coding upstream 181378 39805944 ~ 39806156 (+)
G1447648 NA non-coding upstream 220289 39720797 ~ 39767245 (+)
G1447558 NA non-coding upstream 269654 39697218 ~ 39717880 (+)
G1448318 NA non-coding downstream 285851 40273860 ~ 40274685 (+)
G1448324 NA non-coding downstream 288299 40276308 ~ 40276575 (+)
G1448325 NA non-coding downstream 288778 40276787 ~ 40277138 (+)
G1448327 NA non-coding downstream 290156 40278165 ~ 40278684 (+)
G1448328 NA non-coding downstream 291233 40279242 ~ 40279452 (+)
G1447998 NA other upstream 187298 39799936 ~ 39800236 (+)
G1446149 NA other upstream 1676670 38309129 ~ 38310864 (+)
rbl1 rbl1 other upstream 2398807 37538220 ~ 37588797 (+)
chd6 NA other upstream 2547122 37406926 ~ 37514061 (+)
LOC110493897 LOC106565282 other downstream 1654114 41641874 ~ 41706180 (+)
G1450387 NA other downstream 1804874 41792883 ~ 41890515 (+)
G1451948 LOC570405 other downstream 3340577 43328586 ~ 43459832 (+)
G1451956 LOC106958509 other downstream 3341090 43329099 ~ 43409816 (+)

Expression



Co-expression Network