Gene
RNA
| Item | Value |
|---|---|
| gene id | G1448318 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 40273860 ~ 40274685 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1657576 | True | 826 | lncRNA | 0.44 | 1 | 40273860 | 40274685 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493888 | LOC106565077 | coding | upstream | 4025 | 39948626 ~ 40269835 (+) |
| LOC110493887 | LOC106565076 | coding | upstream | 356063 | 39906273 ~ 39917797 (+) |
| LOC110493884 | LOC106565072 | coding | upstream | 577834 | 39651864 ~ 39696026 (+) |
| ccndbp1 | ccndbp1 | coding | upstream | 752362 | 39500696 ~ 39521498 (+) |
| pmepa1 | pmepa1 | coding | upstream | 854049 | 39342991 ~ 39426900 (+) |
| LOC110493889 | LOC106565080 | coding | downstream | 38191 | 40312876 ~ 40367740 (+) |
| LOC118940425 | dnttip1 | coding | downstream | 93072 | 40367757 ~ 40378949 (+) |
| LOC118940426 | LOC106565291 | coding | downstream | 108500 | 40383185 ~ 40385420 (+) |
| LOC110493184 | LOC106565288 | coding | downstream | 173842 | 40448527 ~ 40474689 (+) |
| LOC110493893 | cdh22 | coding | downstream | 492780 | 40767465 ~ 41084819 (+) |
| G1448174 | NA | non-coding | upstream | 285851 | 39987534 ~ 39988009 (+) |
| G1448150 | NA | non-coding | upstream | 332559 | 39940925 ~ 39941301 (+) |
| G1448130 | NA | non-coding | upstream | 369399 | 39904260 ~ 39904461 (+) |
| G1448007 | NA | non-coding | upstream | 467704 | 39805944 ~ 39806156 (+) |
| G1447648 | NA | non-coding | upstream | 506615 | 39720797 ~ 39767245 (+) |
| G1448324 | NA | non-coding | downstream | 1623 | 40276308 ~ 40276575 (+) |
| G1448325 | NA | non-coding | downstream | 2102 | 40276787 ~ 40277138 (+) |
| G1448327 | NA | non-coding | downstream | 3480 | 40278165 ~ 40278684 (+) |
| G1448328 | NA | non-coding | downstream | 4557 | 40279242 ~ 40279452 (+) |
| G1448329 | NA | non-coding | downstream | 4823 | 40279508 ~ 40279848 (+) |
| G1447998 | NA | other | upstream | 473624 | 39799936 ~ 39800236 (+) |
| G1446149 | NA | other | upstream | 1962996 | 38309129 ~ 38310864 (+) |
| rbl1 | rbl1 | other | upstream | 2685133 | 37538220 ~ 37588797 (+) |
| chd6 | NA | other | upstream | 2833448 | 37406926 ~ 37514061 (+) |
| LOC110493897 | LOC106565282 | other | downstream | 1367438 | 41641874 ~ 41706180 (+) |
| G1450387 | NA | other | downstream | 1518198 | 41792883 ~ 41890515 (+) |
| G1451948 | LOC570405 | other | downstream | 3053901 | 43328586 ~ 43459832 (+) |
| G1451956 | LOC106958509 | other | downstream | 3054414 | 43329099 ~ 43409816 (+) |
