G1448325


Basic Information

Item Value
gene id G1448325
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 40276787 ~ 40277138 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1657583
gtgtcttgctaattgcctatattttccacctgttgtctattcaatttgcacaacagcatgtgaaatgtattatcaatcagtgttgcttcctaaaagtggacagtttgatttcacagaagtgtgattgacttggagttacattgtgttgtttaagtgttccctttatttttttgagtagtGTATTTTCAAGTCACCTCGCACAGCCGCGATCGGTCGTGTGTTTTCCAGTTGCGCCATCAAAGTAGAAGTTCTGATCTTCTTTCGGGATCACGGGGAAAACTGCATTTTCTTTGCGACTGAGGCTGAGCATCCCCACAAAGCAGAACAGCCTCCCATGTTTGTTTactttttg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1657583 True 352 lncRNA 0.41 1 40276787 40277138

Neighbor

gene id symbol gene type direction distance location
LOC110493888 LOC106565077 coding upstream 6952 39948626 ~ 40269835 (+)
LOC110493887 LOC106565076 coding upstream 358990 39906273 ~ 39917797 (+)
LOC110493884 LOC106565072 coding upstream 580761 39651864 ~ 39696026 (+)
ccndbp1 ccndbp1 coding upstream 755289 39500696 ~ 39521498 (+)
pmepa1 pmepa1 coding upstream 856976 39342991 ~ 39426900 (+)
LOC110493889 LOC106565080 coding downstream 35738 40312876 ~ 40367740 (+)
LOC118940425 dnttip1 coding downstream 90619 40367757 ~ 40378949 (+)
LOC118940426 LOC106565291 coding downstream 106047 40383185 ~ 40385420 (+)
LOC110493184 LOC106565288 coding downstream 171389 40448527 ~ 40474689 (+)
LOC110493893 cdh22 coding downstream 490327 40767465 ~ 41084819 (+)
G1448324 NA non-coding upstream 212 40276308 ~ 40276575 (+)
G1448318 NA non-coding upstream 2102 40273860 ~ 40274685 (+)
G1448174 NA non-coding upstream 288778 39987534 ~ 39988009 (+)
G1448150 NA non-coding upstream 335486 39940925 ~ 39941301 (+)
G1448130 NA non-coding upstream 372326 39904260 ~ 39904461 (+)
G1448327 NA non-coding downstream 1027 40278165 ~ 40278684 (+)
G1448328 NA non-coding downstream 2104 40279242 ~ 40279452 (+)
G1448329 NA non-coding downstream 2370 40279508 ~ 40279848 (+)
G1448330 NA non-coding downstream 2806 40279944 ~ 40280161 (+)
G1448349 NA non-coding downstream 25818 40302956 ~ 40303304 (+)
G1447998 NA other upstream 476551 39799936 ~ 39800236 (+)
G1446149 NA other upstream 1965923 38309129 ~ 38310864 (+)
rbl1 rbl1 other upstream 2688060 37538220 ~ 37588797 (+)
chd6 NA other upstream 2836375 37406926 ~ 37514061 (+)
LOC110493897 LOC106565282 other downstream 1364985 41641874 ~ 41706180 (+)
G1450387 NA other downstream 1515745 41792883 ~ 41890515 (+)
G1451948 LOC570405 other downstream 3051448 43328586 ~ 43459832 (+)
G1451956 LOC106958509 other downstream 3051961 43329099 ~ 43409816 (+)

Expression


Co-expression Network