Gene
RNA
| Item | Value |
|---|---|
| gene id | G1448330 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 40279944 ~ 40280161 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1657588 | True | 218 | lncRNA | 0.39 | 1 | 40279944 | 40280161 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493888 | LOC106565077 | coding | upstream | 10109 | 39948626 ~ 40269835 (+) |
| LOC110493887 | LOC106565076 | coding | upstream | 362147 | 39906273 ~ 39917797 (+) |
| LOC110493884 | LOC106565072 | coding | upstream | 583918 | 39651864 ~ 39696026 (+) |
| ccndbp1 | ccndbp1 | coding | upstream | 758446 | 39500696 ~ 39521498 (+) |
| pmepa1 | pmepa1 | coding | upstream | 860133 | 39342991 ~ 39426900 (+) |
| LOC110493889 | LOC106565080 | coding | downstream | 32715 | 40312876 ~ 40367740 (+) |
| LOC118940425 | dnttip1 | coding | downstream | 87596 | 40367757 ~ 40378949 (+) |
| LOC118940426 | LOC106565291 | coding | downstream | 103024 | 40383185 ~ 40385420 (+) |
| LOC110493184 | LOC106565288 | coding | downstream | 168366 | 40448527 ~ 40474689 (+) |
| LOC110493893 | cdh22 | coding | downstream | 487304 | 40767465 ~ 41084819 (+) |
| G1448329 | NA | non-coding | upstream | 96 | 40279508 ~ 40279848 (+) |
| G1448328 | NA | non-coding | upstream | 492 | 40279242 ~ 40279452 (+) |
| G1448327 | NA | non-coding | upstream | 1260 | 40278165 ~ 40278684 (+) |
| G1448325 | NA | non-coding | upstream | 2806 | 40276787 ~ 40277138 (+) |
| G1448324 | NA | non-coding | upstream | 3369 | 40276308 ~ 40276575 (+) |
| G1448349 | NA | non-coding | downstream | 22795 | 40302956 ~ 40303304 (+) |
| G1448357 | NA | non-coding | downstream | 36665 | 40316826 ~ 40317353 (+) |
| G1448405 | NA | non-coding | downstream | 149408 | 40429569 ~ 40429816 (+) |
| G1448406 | NA | non-coding | downstream | 150606 | 40430767 ~ 40430995 (+) |
| G1447998 | NA | other | upstream | 479708 | 39799936 ~ 39800236 (+) |
| G1446149 | NA | other | upstream | 1969080 | 38309129 ~ 38310864 (+) |
| rbl1 | rbl1 | other | upstream | 2691217 | 37538220 ~ 37588797 (+) |
| chd6 | NA | other | upstream | 2839532 | 37406926 ~ 37514061 (+) |
| LOC110493897 | LOC106565282 | other | downstream | 1361962 | 41641874 ~ 41706180 (+) |
| G1450387 | NA | other | downstream | 1512722 | 41792883 ~ 41890515 (+) |
| G1451948 | LOC570405 | other | downstream | 3048425 | 43328586 ~ 43459832 (+) |
| G1451956 | LOC106958509 | other | downstream | 3048938 | 43329099 ~ 43409816 (+) |
