G1448349


Basic Information

Item Value
gene id G1448349
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 40302956 ~ 40303304 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1657609
GTATCCTCGAAAGCGAATTTAAGTAGGACCATCCTGTTACTCTGCTCAAACCATCTTATTACGCTAGTCTCATCACCTCATTGGTGAACCATTGATatggctggctagcctatcttcaagaGCGAATGAAAGGAAAatcaactctgtagttctgttcaggactacacaaAAAGTCACCGGATACCGGACAACTACAAAAAAGGACAACAGTAGAAGAGCTGTTGGAAACATttcggacaatcagagccttacaagctTGCCGCGAAAAGGCCCAAACCCCTTTCCAAGGCTGCCCCGTTCACTGAGAGATCGCCAGTGAACCCAGGCATTTCACATAAATACATTCACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1657609 True 349 lncRNA 0.45 1 40302956 40303304

Neighbor

gene id symbol gene type direction distance location
LOC110493888 LOC106565077 coding upstream 33121 39948626 ~ 40269835 (+)
LOC110493887 LOC106565076 coding upstream 385159 39906273 ~ 39917797 (+)
LOC110493884 LOC106565072 coding upstream 606930 39651864 ~ 39696026 (+)
ccndbp1 ccndbp1 coding upstream 781458 39500696 ~ 39521498 (+)
pmepa1 pmepa1 coding upstream 883145 39342991 ~ 39426900 (+)
LOC110493889 LOC106565080 coding downstream 9572 40312876 ~ 40367740 (+)
LOC118940425 dnttip1 coding downstream 64453 40367757 ~ 40378949 (+)
LOC118940426 LOC106565291 coding downstream 79881 40383185 ~ 40385420 (+)
LOC110493184 LOC106565288 coding downstream 145223 40448527 ~ 40474689 (+)
LOC110493893 cdh22 coding downstream 464161 40767465 ~ 41084819 (+)
G1448330 NA non-coding upstream 22795 40279944 ~ 40280161 (+)
G1448329 NA non-coding upstream 23108 40279508 ~ 40279848 (+)
G1448328 NA non-coding upstream 23504 40279242 ~ 40279452 (+)
G1448327 NA non-coding upstream 24272 40278165 ~ 40278684 (+)
G1448325 NA non-coding upstream 25818 40276787 ~ 40277138 (+)
G1448357 NA non-coding downstream 13522 40316826 ~ 40317353 (+)
G1448405 NA non-coding downstream 126265 40429569 ~ 40429816 (+)
G1448406 NA non-coding downstream 127463 40430767 ~ 40430995 (+)
G1448441 NA non-coding downstream 212390 40515694 ~ 40522238 (+)
G1447998 NA other upstream 502720 39799936 ~ 39800236 (+)
G1446149 NA other upstream 1992092 38309129 ~ 38310864 (+)
rbl1 rbl1 other upstream 2714229 37538220 ~ 37588797 (+)
chd6 NA other upstream 2862544 37406926 ~ 37514061 (+)
LOC110493897 LOC106565282 other downstream 1338819 41641874 ~ 41706180 (+)
G1450387 NA other downstream 1489579 41792883 ~ 41890515 (+)
G1451948 LOC570405 other downstream 3025282 43328586 ~ 43459832 (+)
G1451956 LOC106958509 other downstream 3025795 43329099 ~ 43409816 (+)

Expression


Co-expression Network