G1448405


Basic Information

Item Value
gene id G1448405
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 40429569 ~ 40429816 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1657671
gttttgctagcacagactggaaaatgttctgggattctcccggttgcattaaggagtacaccacatcagtcactggcttcatcaataagtgcatcgaggatgtcgtccccacagtgactgtacgtacataccccaaccagaagccatgaattacaggcaacatttgcactgagctaaagggtagagctgccgcttttaaggagcgggactctgttagagtcgtgtgtataggtggcagagaagtcagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1657671 True 248 lncRNA 0.49 1 40429569 40429816

Neighbor

gene id symbol gene type direction distance location
LOC118940426 LOC106565291 coding upstream 44149 40383185 ~ 40385420 (+)
LOC118940425 dnttip1 coding upstream 50620 40367757 ~ 40378949 (+)
LOC110493889 LOC106565080 coding upstream 61829 40312876 ~ 40367740 (+)
LOC110493888 LOC106565077 coding upstream 159734 39948626 ~ 40269835 (+)
LOC110493887 LOC106565076 coding upstream 511772 39906273 ~ 39917797 (+)
LOC110493184 LOC106565288 coding downstream 18711 40448527 ~ 40474689 (+)
LOC110493893 cdh22 coding downstream 337649 40767465 ~ 41084819 (+)
LOC110493894 LOC106565283 coding downstream 1100357 41530173 ~ 41547714 (+)
LOC110493897 LOC106565282 coding downstream 1212058 41641874 ~ 41706180 (+)
LOC110493901 LOC106565279 coding downstream 1392546 41822362 ~ 41887681 (+)
G1448357 NA non-coding upstream 112216 40316826 ~ 40317353 (+)
G1448349 NA non-coding upstream 126265 40302956 ~ 40303304 (+)
G1448330 NA non-coding upstream 149408 40279944 ~ 40280161 (+)
G1448329 NA non-coding upstream 149721 40279508 ~ 40279848 (+)
G1448328 NA non-coding upstream 150117 40279242 ~ 40279452 (+)
G1448406 NA non-coding downstream 951 40430767 ~ 40430995 (+)
G1448441 NA non-coding downstream 85878 40515694 ~ 40522238 (+)
G1448906 NA non-coding downstream 125409 40555225 ~ 40555937 (+)
G1448908 NA non-coding downstream 127337 40557153 ~ 40557910 (+)
G1447998 NA other upstream 629333 39799936 ~ 39800236 (+)
pmepa1 pmepa1 other upstream 1002669 39342991 ~ 39426900 (+)
G1446149 NA other upstream 2118705 38309129 ~ 38310864 (+)
rbl1 rbl1 other upstream 2840842 37538220 ~ 37588797 (+)
chd6 NA other upstream 2989157 37406926 ~ 37514061 (+)
G1450387 NA other downstream 1363067 41792883 ~ 41890515 (+)
G1451948 LOC570405 other downstream 2898770 43328586 ~ 43459832 (+)
G1451956 LOC106958509 other downstream 2899283 43329099 ~ 43409816 (+)

Expression


Co-expression Network