G1448406


Basic Information

Item Value
gene id G1448406
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 40430767 ~ 40430995 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1657672
CCGCGTGCCGgaaccaattgtccaccgcaggagcctcggtctgactctgatgccaaggagccagaaccggctgatgccctaatacacattgaaagggagaaaggttagtggaggagtggcgtagcgagttctgggccatctctgcccagggtacgaacttcgcccactcctccggccggtcctggcaataagaccacaGAAACCtccccacatcctggttaactctctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1657672 True 229 lncRNA 0.58 1 40430767 40430995

Neighbor

gene id symbol gene type direction distance location
LOC118940426 LOC106565291 coding upstream 45347 40383185 ~ 40385420 (+)
LOC118940425 dnttip1 coding upstream 51818 40367757 ~ 40378949 (+)
LOC110493889 LOC106565080 coding upstream 63027 40312876 ~ 40367740 (+)
LOC110493888 LOC106565077 coding upstream 160932 39948626 ~ 40269835 (+)
LOC110493887 LOC106565076 coding upstream 512970 39906273 ~ 39917797 (+)
LOC110493184 LOC106565288 coding downstream 17532 40448527 ~ 40474689 (+)
LOC110493893 cdh22 coding downstream 336470 40767465 ~ 41084819 (+)
LOC110493894 LOC106565283 coding downstream 1099178 41530173 ~ 41547714 (+)
LOC110493897 LOC106565282 coding downstream 1210879 41641874 ~ 41706180 (+)
LOC110493901 LOC106565279 coding downstream 1391367 41822362 ~ 41887681 (+)
G1448405 NA non-coding upstream 951 40429569 ~ 40429816 (+)
G1448357 NA non-coding upstream 113414 40316826 ~ 40317353 (+)
G1448349 NA non-coding upstream 127463 40302956 ~ 40303304 (+)
G1448330 NA non-coding upstream 150606 40279944 ~ 40280161 (+)
G1448329 NA non-coding upstream 150919 40279508 ~ 40279848 (+)
G1448441 NA non-coding downstream 84699 40515694 ~ 40522238 (+)
G1448906 NA non-coding downstream 124230 40555225 ~ 40555937 (+)
G1448908 NA non-coding downstream 126158 40557153 ~ 40557910 (+)
G1448921 NA non-coding downstream 134374 40565369 ~ 40565624 (+)
G1447998 NA other upstream 630531 39799936 ~ 39800236 (+)
pmepa1 pmepa1 other upstream 1003867 39342991 ~ 39426900 (+)
G1446149 NA other upstream 2119903 38309129 ~ 38310864 (+)
rbl1 rbl1 other upstream 2842040 37538220 ~ 37588797 (+)
chd6 NA other upstream 2990355 37406926 ~ 37514061 (+)
G1450387 NA other downstream 1361888 41792883 ~ 41890515 (+)
G1451948 LOC570405 other downstream 2897591 43328586 ~ 43459832 (+)
G1451956 LOC106958509 other downstream 2898104 43329099 ~ 43409816 (+)

Expression


Co-expression Network