G1448906


Basic Information

Item Value
gene id G1448906
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 40555225 ~ 40555937 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1658204
agtatagtataaagtggctagtgatacatgtattacataaggataccgtcgatgatatagagtacagtatatacgtatgcatatgagatgaataatgtagggtaagtaacatttatttaaggtagcattgtttaaagtggctagtgatatatttacgtcatttcccatcaattcccattattaaagtggctggagttgagtcagtgtcagtgtgttggcagcagccactcagtgttaatggtggctgtttaacagtctgatggccttgagatagaagctgtttttcagtctctcggtcccagctttgatgcacctgtactgacctcgccttctggatgatagcggggtgaacaggcagtggctcgggtggttgatgtccttgatgatctttatggccttcctgtgacatcgggtggtgtaggtgtcctggagggcaggtagtttgcccccggtgatgcgttgtgcagacctcactaccctctggagagccttgcggttgagggcggtgcagttgccataccaggcggtgatacagcccgccaggatgctctcgattgtgcatctgtagaagtttgtgagtgcttttggtgacaagccgaatttcttcagcctcctgaggttgaagaggcgctgctgcgccttcttcacgatgctgtctgtgtgagtggaccaattcagtttgtctgtgatgtgtatgccgaggaacttaaaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1658204 True 713 lncRNA 0.48 1 40555225 40555937

Neighbor

gene id symbol gene type direction distance location
LOC110493184 LOC106565288 coding upstream 80536 40448527 ~ 40474689 (+)
LOC118940426 LOC106565291 coding upstream 169805 40383185 ~ 40385420 (+)
LOC118940425 dnttip1 coding upstream 176276 40367757 ~ 40378949 (+)
LOC110493889 LOC106565080 coding upstream 187485 40312876 ~ 40367740 (+)
LOC110493888 LOC106565077 coding upstream 285390 39948626 ~ 40269835 (+)
LOC110493893 cdh22 coding downstream 211528 40767465 ~ 41084819 (+)
LOC110493894 LOC106565283 coding downstream 974236 41530173 ~ 41547714 (+)
LOC110493897 LOC106565282 coding downstream 1085937 41641874 ~ 41706180 (+)
LOC110493901 LOC106565279 coding downstream 1266425 41822362 ~ 41887681 (+)
LOC110493904 LOC106565276 coding downstream 1474053 42029990 ~ 42108742 (+)
G1448441 NA non-coding upstream 32987 40515694 ~ 40522238 (+)
G1448406 NA non-coding upstream 124230 40430767 ~ 40430995 (+)
G1448405 NA non-coding upstream 125409 40429569 ~ 40429816 (+)
G1448357 NA non-coding upstream 237872 40316826 ~ 40317353 (+)
G1448908 NA non-coding downstream 1216 40557153 ~ 40557910 (+)
G1448921 NA non-coding downstream 9432 40565369 ~ 40565624 (+)
G1448927 NA non-coding downstream 11773 40567710 ~ 40567985 (+)
G1449046 NA non-coding downstream 95772 40651709 ~ 40660325 (+)
G1449142 NA non-coding downstream 162185 40718122 ~ 40718802 (+)
G1447998 NA other upstream 754989 39799936 ~ 39800236 (+)
pmepa1 pmepa1 other upstream 1128325 39342991 ~ 39426900 (+)
G1446149 NA other upstream 2244361 38309129 ~ 38310864 (+)
rbl1 rbl1 other upstream 2966498 37538220 ~ 37588797 (+)
chd6 NA other upstream 3114813 37406926 ~ 37514061 (+)
G1450387 NA other downstream 1236946 41792883 ~ 41890515 (+)
G1451948 LOC570405 other downstream 2772649 43328586 ~ 43459832 (+)
G1451956 LOC106958509 other downstream 2773162 43329099 ~ 43409816 (+)

Expression


Co-expression Network