G1448927


Basic Information

Item Value
gene id G1448927
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 40567710 ~ 40567985 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1658225
atatatattttcccacaaatatgtATTCAATTTTTCCCCAGAGTAAGAGTTATACTCTTcatttcatagctttcctcttggttgcactgcttccagccccaggttgagatttggagggctggtctttatgttaGATCTTTTATCCAATCATATTCAGCCATCATGAGTTGCCAGGGGTCTAAAATCTGCCCTCAGGCCTTCAGAATCAACAGTGCGGCGCTTGTAGCTTGAAGTGAATGGAAATCAAAATttagtgtcaaccaatcagctttagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1658225 True 276 lncRNA 0.41 1 40567710 40567985

Neighbor

gene id symbol gene type direction distance location
LOC110493184 LOC106565288 coding upstream 93021 40448527 ~ 40474689 (+)
LOC118940426 LOC106565291 coding upstream 182290 40383185 ~ 40385420 (+)
LOC118940425 dnttip1 coding upstream 188761 40367757 ~ 40378949 (+)
LOC110493889 LOC106565080 coding upstream 199970 40312876 ~ 40367740 (+)
LOC110493888 LOC106565077 coding upstream 297875 39948626 ~ 40269835 (+)
LOC110493893 cdh22 coding downstream 199480 40767465 ~ 41084819 (+)
LOC110493894 LOC106565283 coding downstream 962188 41530173 ~ 41547714 (+)
LOC110493897 LOC106565282 coding downstream 1073889 41641874 ~ 41706180 (+)
LOC110493901 LOC106565279 coding downstream 1254377 41822362 ~ 41887681 (+)
LOC110493904 LOC106565276 coding downstream 1462005 42029990 ~ 42108742 (+)
G1448921 NA non-coding upstream 2086 40565369 ~ 40565624 (+)
G1448908 NA non-coding upstream 9800 40557153 ~ 40557910 (+)
G1448906 NA non-coding upstream 11773 40555225 ~ 40555937 (+)
G1448441 NA non-coding upstream 45472 40515694 ~ 40522238 (+)
G1449046 NA non-coding downstream 83724 40651709 ~ 40660325 (+)
G1449142 NA non-coding downstream 150137 40718122 ~ 40718802 (+)
G1449144 NA non-coding downstream 151039 40719024 ~ 40719442 (+)
G1449203 NA non-coding downstream 190857 40758842 ~ 40759062 (+)
G1447998 NA other upstream 767474 39799936 ~ 39800236 (+)
pmepa1 pmepa1 other upstream 1140810 39342991 ~ 39426900 (+)
G1446149 NA other upstream 2256846 38309129 ~ 38310864 (+)
rbl1 rbl1 other upstream 2978983 37538220 ~ 37588797 (+)
chd6 NA other upstream 3127298 37406926 ~ 37514061 (+)
G1450387 NA other downstream 1224898 41792883 ~ 41890515 (+)
G1451948 LOC570405 other downstream 2760601 43328586 ~ 43459832 (+)
G1451956 LOC106958509 other downstream 2761114 43329099 ~ 43409816 (+)

Expression


Co-expression Network