G1449046



Basic Information


Item Value
gene id G1449046
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 40651709 ~ 40660325 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1658345
gttaatactttgtagcgccacctgctgcgattacaactgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgacattttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctg

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
TU1658345 True 232 lncRNA 0.45 2 40651709 40660325

Neighbor


gene id symbol gene type direction distance location
LOC110493184 LOC106565288 coding upstream 177020 40448527 ~ 40474689 (+)
LOC118940426 LOC106565291 coding upstream 266289 40383185 ~ 40385420 (+)
LOC118940425 dnttip1 coding upstream 272760 40367757 ~ 40378949 (+)
LOC110493889 LOC106565080 coding upstream 283969 40312876 ~ 40367740 (+)
LOC110493888 LOC106565077 coding upstream 381874 39948626 ~ 40269835 (+)
LOC110493893 cdh22 coding downstream 107140 40767465 ~ 41084819 (+)
LOC110493894 LOC106565283 coding downstream 869848 41530173 ~ 41547714 (+)
LOC110493897 LOC106565282 coding downstream 981549 41641874 ~ 41706180 (+)
LOC110493901 LOC106565279 coding downstream 1162037 41822362 ~ 41887681 (+)
LOC110493904 LOC106565276 coding downstream 1369665 42029990 ~ 42108742 (+)
G1448927 NA non-coding upstream 83724 40567710 ~ 40567985 (+)
G1448921 NA non-coding upstream 86085 40565369 ~ 40565624 (+)
G1448908 NA non-coding upstream 93799 40557153 ~ 40557910 (+)
G1448906 NA non-coding upstream 95772 40555225 ~ 40555937 (+)
G1448441 NA non-coding upstream 129471 40515694 ~ 40522238 (+)
G1449142 NA non-coding downstream 57797 40718122 ~ 40718802 (+)
G1449144 NA non-coding downstream 58699 40719024 ~ 40719442 (+)
G1449203 NA non-coding downstream 98517 40758842 ~ 40759062 (+)
G1449362 NA non-coding downstream 302231 40962556 ~ 40976384 (+)
G1447998 NA other upstream 851473 39799936 ~ 39800236 (+)
pmepa1 pmepa1 other upstream 1224809 39342991 ~ 39426900 (+)
G1446149 NA other upstream 2340845 38309129 ~ 38310864 (+)
rbl1 rbl1 other upstream 3062982 37538220 ~ 37588797 (+)
chd6 NA other upstream 3211297 37406926 ~ 37514061 (+)
G1450387 NA other downstream 1132558 41792883 ~ 41890515 (+)
G1451948 LOC570405 other downstream 2668261 43328586 ~ 43459832 (+)
G1451956 LOC106958509 other downstream 2668774 43329099 ~ 43409816 (+)

Expression



Co-expression Network