G1449142


Basic Information

Item Value
gene id G1449142
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 40718122 ~ 40718802 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1658442
gattataaacgtttactaatacctaaagttggattacaaaagtatttcgaagtgttttgtgaaagtttatcgtcgacttttttaatttaaaaaaatgacgcagcgttttgaaacaatgtttttttctgaattacacagtttccatagatggctattttgggtatatatggaccgatttaatcgaaaaaaagacccaatagtgatgtttatggggcatataggagtgccaagaaagaagctcgtcaaaggtaatgaatgttttatattttatttctgctatttgtgtagcgccggctacgctaattcttttgtttacgtcgccttcaggcattttggggtgttgcatgctatcagataatagcttctcatgctttcgccgaaaagcattttaaaaatctgacttgttggctagattcacaacgagtgtagctttaattcaataccctgtatgtgtgttttaatgaacgtttgagttttaacgagtacatttagcatttagcgtagcgcatttgcatttccaggtgcctacttgagacgtctgcgtctcaagtaggatcaacaggttAAACTACCAAAATGAAAAGGGCCTGGaagtttttgttttttcattaaggtttgcaaatacacacacacaaaacatgttaTGACTATTTTTTGGTGTTTTTAAAATACTATGTTTGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1658442 True 681 lncRNA 0.35 1 40718122 40718802

Neighbor

gene id symbol gene type direction distance location
LOC110493184 LOC106565288 coding upstream 243433 40448527 ~ 40474689 (+)
LOC118940426 LOC106565291 coding upstream 332702 40383185 ~ 40385420 (+)
LOC118940425 dnttip1 coding upstream 339173 40367757 ~ 40378949 (+)
LOC110493889 LOC106565080 coding upstream 350382 40312876 ~ 40367740 (+)
LOC110493888 LOC106565077 coding upstream 448287 39948626 ~ 40269835 (+)
LOC110493893 cdh22 coding downstream 48663 40767465 ~ 41084819 (+)
LOC110493894 LOC106565283 coding downstream 811371 41530173 ~ 41547714 (+)
LOC110493897 LOC106565282 coding downstream 923072 41641874 ~ 41706180 (+)
LOC110493901 LOC106565279 coding downstream 1103560 41822362 ~ 41887681 (+)
LOC110493904 LOC106565276 coding downstream 1311188 42029990 ~ 42108742 (+)
G1449046 NA non-coding upstream 57797 40651709 ~ 40660325 (+)
G1448927 NA non-coding upstream 150137 40567710 ~ 40567985 (+)
G1448921 NA non-coding upstream 152498 40565369 ~ 40565624 (+)
G1448908 NA non-coding upstream 160212 40557153 ~ 40557910 (+)
G1448906 NA non-coding upstream 162185 40555225 ~ 40555937 (+)
G1449144 NA non-coding downstream 222 40719024 ~ 40719442 (+)
G1449203 NA non-coding downstream 40040 40758842 ~ 40759062 (+)
G1449362 NA non-coding downstream 243754 40962556 ~ 40976384 (+)
G1449408 NA non-coding downstream 356293 41075095 ~ 41075326 (+)
G1447998 NA other upstream 917886 39799936 ~ 39800236 (+)
pmepa1 pmepa1 other upstream 1291222 39342991 ~ 39426900 (+)
G1446149 NA other upstream 2407258 38309129 ~ 38310864 (+)
rbl1 rbl1 other upstream 3129395 37538220 ~ 37588797 (+)
chd6 NA other upstream 3277710 37406926 ~ 37514061 (+)
G1450387 NA other downstream 1074081 41792883 ~ 41890515 (+)
G1451948 LOC570405 other downstream 2609784 43328586 ~ 43459832 (+)
G1451956 LOC106958509 other downstream 2610297 43329099 ~ 43409816 (+)

Expression


Co-expression Network